KEGG   Micropterus salmoides (largemouth bass): 119917166
Entry
119917166         CDS       T07309                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119917166 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msam03041]
    119917166 (smndc1)
Spliceosome [BR:msam03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119917166 (smndc1)
 Complex B
    119917166 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    119917166 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR PUA_4 T3SS_needle_F
Other DBs
NCBI-GeneID: 119917166
NCBI-ProteinID: XP_038593238
LinkDB
Position
Unknown
AA seq 235 aa
MSDDLVKQLNSYKAQLQQVEVALSTDPENEDLLKLQKDLQEVIDLTKDLLTSQPAESASS
TNGSERVPLKHGWKVGDRCMATWSQDGQVYEAEIEEIDRENGTAAVTFSGYGNAEVIPLQ
NLKAVEEGKRSDDDKPKSRKEQIAEQREYKKKKAQKKVARMKELEQEREEQKSKWQQFNN
KAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 708 nt   +upstreamnt  +downstreamnt
atgtcggacgacctggtgaaacagttaaacagctacaaagcccagcttcagcaagtagaa
gttgcgttatctactgacccagaaaatgaagacctccttaaattacagaaagacttacag
gaagtcatcgatttgacaaaagacctcctgacctcacagcccgccgagagtgcttccagt
accaatggctcagagagagttcccctgaagcatggctggaaagtgggggacaggtgtatg
gctacgtggagtcaggatggacaggtgtatgaggctgagattgaggagatagaccgagag
aacggcactgcagccgtgaccttctctggatatgggaatgctgaagtgattcctctgcag
aacctcaaagcagtagaggaggggaaacgctctgatgacgataagccaaagtcaaggaaa
gagcagatagcagagcagagagagtataagaagaagaaagcccagaagaaggtagcgagg
atgaaggaattggagcaagagagggaggagcaaaagtcaaagtggcaacagttcaacaac
aaagcctactcaaagaacaagaaaggacaggtgaagaggagcatatttgcatctccagaa
agcgtaaacgggaaggtgggagtgggaacatgtggtattgcagacaagcctatgacccag
taccatgacacatcaaaatacaatgtcagacatctaatgccacagtga

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