Micropterus salmoides (largemouth bass): 119917251
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Entry
119917251 CDS
T07309
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04060
Cytokine-cytokine receptor interaction
msam04672
Intestinal immune network for IgA production
msam04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119917251 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119917251 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
119917251 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
msam04052
]
119917251 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119917251 (cxcl12a)
Cytokines and neuropeptides [BR:
msam04052
]
Cytokines
Chemokines
119917251 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Chemokines
119917251 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
119917251
NCBI-ProteinID:
XP_038593392
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MDVKLLVVVAALTVVIYAPSSQAKPISLVERCYCRSTVNSVPRGYIRELRFIHTPNCPFQ
VIAKLKSSKEVCVNPEVRWLQLYLKNALNKMKKSKQGN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagctgctggtggtcgtggcggcgctcacggtggtgatatatgcgccttca
tcacaagcgaagcccatcagtctggtggagagatgctactgtcgttcaacggtcaacagc
gtcccacggggctacatccgagaactcaggttcatccacacgcccaattgccccttccaa
gtgattgccaagctgaagtcaagcaaagaagtgtgtgtgaacccagaggtccggtggctg
cagctgtacctgaagaacgctctcaacaagatgaagaaatccaaacagggcaactaa
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integrated database retrieval system
