Micropterus salmoides (largemouth bass): 119917373
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Entry
119917373 CDS
T07309
Symbol
ltbp1
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119917373 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119917373 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
119917373 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
119917373
NCBI-ProteinID:
XP_038593609
LinkDB
All DBs
Position
Unknown
AA seq
1540 aa
AA seq
DB search
MDMAWIIWGLLSSFGLILSPVCVSAEQQQSQSGFRRLYVLQPGPGPGATGAGGGVRVSSI
STRHGAAGQPHTYNVELTSSLGGQVRTRRMGSHAASTPQLSQEQSGQEQSQQRQLMKLSG
VNVCGGHCCHGWSKAQGSQRCTKPNCIPQCQNGGMCLRPQLCVCKPGSNGKVCEQKTVPT
HPFPALPGNGPTNGHTNGPTNGHNGVPQRPIPQQVLPNGHASAPPPSSNMAQMKLTVKPA
QLVRPHYIQQHIQQQIRPMHPGQSQQYVIKPKYYHXTHTQTHVQSHPERPIPLTVGHSPI
HVGNHTGRIKVVFTPTICKLTCIGGRCHNNCELGNTTTIISENGHATDTLTAPNFRVVVC
HLPCINGGKCSARDKCQCPPSFTGKFCQMPIQNGHQQHQQTSGSYSQTQVHSTHTLPLTY
SNGQSPVFSPSIVNIHIKHPPEASVQVHQVSQLDNYHNNGHQLKGSQSGSSSSTSYRYHH
TESSQNIQHHGYNIVYPSQHGYQVPQYQPVTSKNTLGRCFQETAGSQCGKALPGLTKQEQ
CCGTIGTSWGFQKCQKCPKKPSIPLIDCPEGYKRINSSHCQDLDECQLQGVCPNGNCLNT
MGSYRCHCKPGYVPDPTLTMCISNTPAIQEEKGACFRLVSSGKQCLHPVSAQLSKQLCCC
SVGKAWGPRCDKCPPPGTAKFKEICPGGMGYTVLPNPPVNKPVTVYQKPIDPLHPQPLPT
PERPVEAFGKPEEIIPVATTAPDQELVVPVISNRPVVEPILPQLSPGVSTVKIEAAYPEV
VERSSPPAPVEILPSNAGQDIAPTQSAEVDQCQISPYICGSGICYNTAESYTCHCDEGYR
LNDAQTTCVDVDDCLESPSLCFGGRCENTEGSFLCVCPRGFLVDEEGSSCVDFDECADRT
VCPSGICFNVPGSYNCGSCPNGFLAQGGQCVDIDECQDQRVCTRGHCQNTEGSFICLCGP
GFRVSPAGDHCDDVDECLEDPRPCEAVGECVNNMGSYTCTCPRGYRQVNGTSCRDIDECV
DEPELCSPHGECLNTEGSYLCVCESGFTANLDTPTCDDIDECGLNETMCGPHGFCENRLG
SFRCLCDQGYQETQDGQSCVDVNECELLSSVCGEAQCVNVDGSFLCVCPSGQDYNVMIAK
CEPFPTASSVERKECYYRLNDENLCESVLTSHVTLQECCCTLGAGWGDNCEVHPCPVNGT
DQFNQMCPSKRGFIPSGDVLYGVTTAESYKDADECTLFGQEVCKGGFCLDTVGSYECYCK
TGQDYDSANLECRDINECLDESVCVGGQCINTDGSYMCFCTHPMMLDPNSNRCIFVPEVA
EQHESDREHYQDICWQTVTETLSCTRPLGQERKTTYTECCCLYGEAWGTYCALCPPRHTE
DYAAMCNLPLGEGRRPYGHDALVAGPVHEYEVNPDYSPSPEQQAGLPFYENEEYPYKAFE
GLQAEECGILNGCENGRCVRVQEGYTCDCFDGYTLDLSRMACVDVNECSELNNRMSLCKN
AKCINTVGSYQCVCLPGFSASDKPNYCVEATVHQTSTHTQ
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcttggattatatggggcctcttatcttctttcgggttgattctctccccg
gtgtgtgtgtcagcggagcagcagcagagccagagcggcttcaggaggctgtacgttctc
cagcccggcccgggcccgggggcgaccggagcgggtggaggggtgcgagtcagctccatc
tcgacgcgtcacggcgcggcggggcagccgcacacgtacaacgtggaactcacctccagc
ctcggtggccaggtccggacccgcaggatggggagccatgcagcttcaaccccgcagctg
agccaggagcagagcggacaggagcagagccagcagaggcagctcatgaaactgtctggg
gtgaatgtctgtggagggcactgctgtcatggatggagcaaagctcagggatcgcagcgg
tgcacaaagcccaactgcatccctcaatgccagaatggaggaatgtgcctcaggcctcag
ctctgtgtctgcaagcctggctcaaatgggaaggtatgtgaacagaagactgtgcccaca
catcccttcccagcactgcctgggaatggacccaccaatggacacactaatggtcccact
aatggacacaatggggtaccccagcggcctataccacagcaagtgcttcccaatgggcat
gcctctgccccccctccatctagcaacatggcccagatgaaactaactgtcaagccggcc
cagcttgtacgaccacattacatccaacagcacatccagcagcagattcggcccatgcac
ccaggtcagagccagcagtatgttataaagcccaaatactaccacnacacacacacacag
acgcatgtccagtcccatcctgagaggccgatcccccttacagtggggcacagccctatc
catgtgggcaaccacacaggaaggatcaaggtggtcttcacaccaaccatctgcaaatta
acctgcataggaggcaggtgtcataacaactgcgagctggggaacaccaccaccatcatc
agtgagaacggtcatgctacagacaccctgacagcacccaacttcagagtagtcgtgtgt
cacctgccgtgtataaatggcggcaaatgcagtgccagggataagtgtcagtgtcctccc
agctttactggaaagttctgtcagatgcccattcagaacggacaccagcagcaccagcag
acatcaggcagctacagtcaaactcaagtccactccacacatacactacctctgacctac
agcaacggccagagtcctgtgttcagccccagcatcgtcaacatccacatcaaacatcct
ccagaggcctctgtccaggtacaccaggtgtctcagctggacaactaccacaacaacggg
caccagctgaaaggttcccagtcaggctcctcttcatccaccagctatagataccaccac
acagagagcagccagaatatccagcaccacggctacaacatagtttatcccagccagcat
ggctaccaggtcccgcagtaccagcccgtcacctccaagaacacgctgggtcgctgcttc
caggagactgcagggagtcagtgtggaaaggctctgccaggtctcactaagcaggagcag
tgttgtgggaccattgggacgtcctggggtttccagaaatgccagaaatgtccaaagaaa
ccatcgatccctctgatagattgtccggagggttacaagagaatcaacagctctcattgc
caagatttagatgagtgccagctacagggagtgtgtcctaatgggaactgtctgaacacc
atgggcagctacaggtgccattgtaaacctggctatgtccctgaccccacgctcaccatg
tgcatatccaacacgcctgccatccaagaggagaagggtgcttgcttccgtttggtcagc
tcagggaagcagtgtttgcacccggtgtctgcccagctgagcaaacagctctgctgctgc
agtgtgggcaaagcctggggccctcgttgtgacaaatgcccccctccaggaacagctaag
ttcaaagagatctgtcccggtggaatgggctacactgttctaccaaatccacctgtcaat
aagccagtcaccgtttaccagaagcccattgacccgctacaccctcaacccctgccaaca
ccagaaagaccagtggaggcttttggcaaaccagaagagattataccagtagcaacaact
gcaccagatcaggagctggtagttcctgtgattagtaacaggccagtagttgaacctatc
ctgccccagctatctccgggtgtatccactgtcaagatcgaggcagcttacccagaggtt
gttgagaggagctctccacctgcaccagtcgagatcctcccatctaatgcaggccaggac
atcgctcccacccagtcagctgaggtggatcagtgccagatcagcccttatatttgtggc
tcagggatttgttacaacacagctgagagttacacctgccactgtgatgagggataccgc
ctgaatgacgcccaaaccacctgtgtagatgtagatgattgtctggaaagcccatctttg
tgctttggcggtcgctgcgagaacacagaaggcagcttcctgtgtgtttgtccgagggga
ttcctcgtcgatgaagagggatccagctgtgttgatttcgatgaatgtgcagacaggaca
gtgtgtccttctggtatctgcttcaacgtgccggggagctacaactgtggctcctgtcct
aatggcttcttggcacagggaggccaatgtgttgatatagatgagtgccaggatcagcgg
gtctgtaccagaggccactgccagaacactgaaggctcctttatctgtctgtgtgggcca
ggtttcagagtgtccccagctggagaccactgtgatgatgtggatgagtgtttagaagac
cccaggccctgtgaggctgtcggggagtgtgttaacaacatgggctcctacacctgtacc
tgccccaggggataccgacaggtcaacggcaccagctgcagagatattgatgagtgcgtg
gatgaaccggagctctgttccccccatggcgagtgtctcaacacagagggatcctatctg
tgtgtgtgtgagagtggattcacggccaacctcgacacacccacctgtgatgatattgat
gagtgtgggctcaatgagacaatgtgtggccctcatggtttttgtgagaacagactgggt
tccttccgatgcctctgtgaccagggctaccaggagacccaggatggccaaagctgtgtg
gatgtgaacgagtgtgagctgctgagcagtgtgtgtggagaagcccagtgtgtgaacgtt
gatggttccttcctctgtgtgtgtcccagcggccaggactacaacgtcatgatcgccaag
tgtgaaccctttcccacagcgtcatcagtggagcgtaaggagtgctactatcgtctgaat
gatgagaacctgtgtgagagtgtgctgaccagccacgtcaccctgcaggagtgctgctgc
actttgggagccggctggggtgacaactgtgaggtgcatccctgtcctgtcaatggcaca
gaccagttcaatcagatgtgtccatctaaaagaggttttattcccagcggagacgtgctg
tacggagtaaccacagctgagagctacaaagatgcagatgaatgtacactgtttggtcag
gaggtgtgtaaaggaggcttctgtctggatactgtgggcagctacgagtgttactgcaag
accggacaggactacgactctgccaacctggagtgcagagacatcaatgagtgtctggat
gagtcagtgtgtgttggtggacagtgcataaacacagatggctcatacatgtgtttctgt
acacatcccatgatgttggaccccaacagtaaccgctgcatctttgttcccgaggtagcc
gagcaacatgagtcggatcgggagcactaccaggatatctgctggcagacggtgacagaa
accctgtcatgtacgaggccgctgggtcaagagaggaagaccacatacacagagtgctgc
tgtctgtatggagaggcctggggcacatactgtgccctgtgtccacccagacacaccgag
gattatgcagctatgtgtaaccttcctctgggtgaaggccggcggccatatggtcatgat
gcccttgttgctggcccagtccatgaatatgaagtgaacccggactattcaccgtcacct
gagcagcaggctggcctgcctttttatgagaatgaggagtatccatacaaggctttcgag
ggtttgcaagcagaggagtgtggaatactgaacggctgtgagaatggtcggtgtgtccgg
gttcaggagggttacacctgtgactgctttgatggatacaccctggacctgtcccgcatg
gcctgcgttgatgtgaacgagtgttcagaactaaacaatcggatgtcgttgtgtaaaaat
gcaaagtgcatcaacacagtgggctcctatcagtgtgtgtgtctgccgggcttctctgcc
tctgacaaacctaactactgtgtggaggcaacagtacaccaaacatcaacacacacacag
tga
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integrated database retrieval system
