Micropterus salmoides (largemouth bass): 119918505
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Entry
119918505 CDS
T07309
Name
(RefSeq) U8 snoRNA-decapping enzyme-like
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00230
Purine metabolism
msam01100
Metabolic pathways
msam01232
Nucleotide metabolism
msam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
119918505
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119918505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119918505
Enzymes [BR:
msam01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
119918505
3.6.1.64 inosine diphosphate phosphatase
119918505
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
119918505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
119918505
NCBI-ProteinID:
XP_038595212
LinkDB
All DBs
Position
Unknown
AA seq
177 aa
AA seq
DB search
MQLLAGDLFSLHTEQLNERLVNPLEETLEAGLSRELLEELGVAIPISVEDHVDSCYAPSS
SPSSSSCLITNFYVKKMEEEQIREIERVAASTATDHGLEVLGMVRVPIYTTKGLASYLSH
SFIGNARAQLVDSLLRFNLVGPRELHKALTYSLKIHTQTAEDLQAALTLTETKWKPL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttttggctggggatctgttttcgctacacactgaacagctgaacgaaaggctc
gttaacccattggaggagacgctggaggctggacttagcagagaattgttggaggagctg
ggcgtggctattcctatatcagtagaagatcatgtggactcctgctatgccccttcttcc
tccccctcctcctcttcctgtcttatcaccaacttttatgtgaagaagatggaggaggaa
caaattagggagatagagagagtggcagcatccacggcaactgatcatggactggaggtt
ttaggaatggtgagagtcccgatctacaccacgaaaggccttgcgtcttacctgtcgcac
tctttcatcggcaacgctcgtgcccagttggtcgactctctgctacgcttcaacctagtt
ggcccaagggagttgcacaaagccctcacatactctctgaagatacacacacaaacggca
gaggacctgcaagcggccctcacactgacagagactaaatggaaaccgctttga
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