KEGG   Metallosphaera sedula DSM 5348: Msed_2110
Entry
Msed_2110         CDS       T00509                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
mse  Metallosphaera sedula DSM 5348
Pathway
mse03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Msed_2110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mse03400]
    Msed_2110
Enzymes [BR:mse01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Msed_2110
DNA repair and recombination proteins [BR:mse03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Msed_2110
 Prokaryotic type
     Msed_2110
SSDB
Motif
Pfam: HhH-GPD Ogg-HhH HHH HHH_5 EndIII_4Fe-2S RecR_HhH
Other DBs
NCBI-ProteinID: ABP96249
UniProt: A4YIJ7
LinkDB
Position
2030667..2031359
AA seq 230 aa
MKCEGKEIVSRLDRAYKIKSEDFLAIEIWEKTRDPFKVLIATILTQNTTDKGAKKAYEEL
DKEVGITAEGLSRADPEVIKRCIRKVGLHNNKTKVIKEVSTKILNEYGGDINKVLDLGLP
KAREKLVELPGVGKKTADVLLITCRDYPVFPIDTHIFRISKRLGIDGNYDKVSSFWREVS
DNLRLRAHLLLITHGRATCKAIKPKCDTCVLNDCCEYYARLRGSQGPETS
NT seq 693 nt   +upstreamnt  +downstreamnt
ttgaagtgtgaaggaaaggagattgtaagtaggttagatagagcctacaagattaaatct
gaggatttcctggcgatagaaatatgggagaaaactagggatcctttcaaggtccttata
gcgaccattttgacccagaataccacagataagggagccaagaaagcgtacgaggaactg
gataaagaggttggaataactgccgaagggcttagtagagccgatccagaggtgataaag
aggtgcattagaaaggtcggccttcacaataacaagactaaggtgattaaggaagtgtca
acgaaaattttgaatgagtatggtggagatatcaacaaggtacttgacctagggttacca
aaggctagggagaaattggtggagctcccaggcgttgggaagaagactgcagacgtctta
ttaataacttgcagagattatccagtgttccccatagacacacatatcttcaggatttcg
aaaaggcttggtattgatggaaactatgacaaggtaagttcgttctggagagaagtttcg
gataatctcaggttgagggcacatctactactcattactcacggtagagctacatgcaaa
gcaattaaacctaaatgtgacacttgtgtacttaatgactgctgcgagtattacgctaga
ctacgtggatcccagggacctgaaacctcatga

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