Methanolobus sediminis: RE474_11260
Help
Entry
RE474_11260 CDS
T09570
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K16792
methanogen homoaconitase large subunit [EC:
4.2.1.114
]
Organism
mseb
Methanolobus sediminis
Pathway
mseb00300
Lysine biosynthesis
mseb00680
Methane metabolism
mseb01100
Metabolic pathways
mseb01110
Biosynthesis of secondary metabolites
mseb01120
Microbial metabolism in diverse environments
mseb01210
2-Oxocarboxylic acid metabolism
mseb01230
Biosynthesis of amino acids
mseb01240
Biosynthesis of cofactors
Module
mseb_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mseb00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RE474_11260
09105 Amino acid metabolism
00300 Lysine biosynthesis
RE474_11260
Enzymes [BR:
mseb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
RE474_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
WMW24653
UniProt:
A0AA51UJB8
LinkDB
All DBs
Position
complement(2260803..2262044)
Genome browser
AA seq
413 aa
AA seq
DB search
MSTISEKIFSRASGKNAKANDFVIADVDFAMAHDGTSVLAVKSFKEMEEEKVWNPDKIII
PFDHLTPANTDITAALHHEIREWIKEQKISNFYDVGEGICHQLLPENGFALPGKLVVGAD
SHSCTYGAFGAFGTGVGATDMSEIFASGKLWFKVPESIKITADGNFKEGVYAKDLILKII
GTLGVAGATYKAAEFYGTAIDSMSMSGRMTLSNMAIEMGGKAGIVPPDKTTFDFLDGIAA
EEYEPVYADADATYSSEYTFDVNELEPQIASPHQVDNVHDISDIKPTKLDQAFIGTCTNG
RLEDLEVAASILKGEKVAIRTLIVPASRNVLIEAVRKGIVETLLEAGAVIGSPGCGPCLG
GHMGVIGKGETCISTANRNFKGRMGVGGFIYLASPATAAASALTGEITDPREI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgagcactataagtgagaaaatctttagccgtgcatccggtaagaatgcgaaagcaaat
gactttgtaatcgcagatgtggattttgccatggcacatgacggcacaagcgtccttgca
gtaaaatcattcaaggaaatggaagaagaaaaagtgtggaacccggataagataattatt
ccttttgaccacctgacacctgcaaatacagacatcactgctgcacttcaccatgagatc
cgcgaatggattaaagagcagaagataagtaatttctacgacgttggagagggaatatgc
caccagttactccctgagaatggatttgccctccccggtaaacttgtagtgggcgcagat
tcgcattcatgtacatatggcgcattcggagcttttggaaccggcgtcggtgccacagat
atgtcagagatatttgcttcaggaaaactctggttcaaggtccctgaaagcataaagata
acagctgacggcaatttcaaggaaggtgtttatgcaaaggacctcatacttaagataata
ggcacactaggtgttgcaggtgcaacctacaaagctgctgaattctatggaactgcaatt
gattccatgtccatgtcaggccgtatgacactcagtaatatggctattgaaatgggtgga
aaagcaggaatagtgccaccggataaaacaacatttgatttccttgatggtatcgcagcg
gaagaatatgaaccagtttatgcggacgcagatgccacatactcaagtgaatacaccttt
gatgtgaatgagcttgagccacagatcgcatctccgcatcaggtcgacaatgttcatgac
atatctgacatcaagccgacaaaacttgaccaggcattcataggcacctgtacaaacgga
aggctggaagaccttgaggtcgccgcatccatacttaaaggggaaaaggttgccatacgc
acacttattgtacctgcgtcccgcaatgtgttgatagaagctgtcagaaaaggcatagtt
gagacactgctggaagcaggagctgttattggctcaccaggatgcggaccatgccttgga
ggtcatatgggagttattggtaaaggagagacctgtatttccacagctaacaggaacttc
aagggaagaatgggtgtaggaggcttcatttacctggcatccccggcaactgctgcggca
tctgcccttaccggtgagattactgatccgcgcgaaatctga
DBGET
integrated database retrieval system
