Marinobacterium sediminicola: LN244_05220
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Entry
LN244_05220 CDS
T07998
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
msec
Marinobacterium sediminicola
Pathway
msec00300
Lysine biosynthesis
msec00550
Peptidoglycan biosynthesis
msec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LN244_05220
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LN244_05220
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msec01011
]
LN244_05220
Enzymes [BR:
msec01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LN244_05220
Peptidoglycan biosynthesis and degradation proteins [BR:
msec01011
]
Precursor biosynthesis
Amino acid ligase
LN244_05220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CNV-Replicase_N
Motif
Other DBs
NCBI-ProteinID:
ULG70216
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Position
1115282..1116796
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AA seq
504 aa
AA seq
DB search
MSIYTQSLLTLLPQASSTLAALPVDRPVVVSGLTLDSRQVKPGDLFFARSGVSCRGADFI
ADAQQKGAVAVVVEEGELTGAERARIKVPLLEVQGLDAVVGEVASRFYGNPSQHLKVIGV
TGTNGKTSCSNYLAQALELLGHRAAVIGTLGNGFLQDLKPATHTTPDAIALQALLAELKQ
AGAEYVVMEVSSHALDQQRVAGMRFVAAGFTNLTRDHLDYHGDMAAYGDAKAKLFVDHMP
ALQAINLDDVFGRTLWQQLQPVQARVEGFGLSEPGADVRVEGLAFGPEGAEFALRVGDEC
AAVKTSLMGSFNVSNLLLCATLLQLMEYPLAQVADVLGKVQPVAGRMQALPVVAHAPSVV
VDFAHTPDALAQALQALRLHRPSEGRLICVFGCGGDRDAGKRPEMGRIVSELADQLVVTS
DNPRSESPAAIIADILAGVSPEAAVHVEADRAAAIRWAIDQAAAEDLVLIAGKGHERWQE
INGVKEPFDDCQQAWHVLQEGADV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctatacacagtccctgttaacactgctgccgcaggcgtcttcgacgctcgcg
gctttgcccgttgataggccggtagtggtgtccgggctgaccctggacagtcgtcaggta
aagccgggtgatctgtttttcgcccgcagcggcgtctcctgtcgcggtgctgatttcatc
gcggacgctcagcagaaaggtgcggtcgcggttgtggttgaagagggtgagctgacgggc
gctgagcgtgcccggatcaaggtgccattgctggaagtacagggactggacgcggtcgtc
ggagaggtggccagtcgtttttatggcaaccccagtcagcacctgaaggtgatcggtgtt
accggtaccaacggcaaaacctcgtgcagcaattatctggcacaggcgctggaattgctg
ggtcatcgagcagcggttatcggcacgctcggtaacggttttctgcaagacctcaagccg
gcaacccataccacgccggatgcgattgccctgcaggccttgctggccgaactgaagcag
gcgggcgcggaatacgtggtgatggaggtgtccagtcatgcgctggatcagcagcgcgtg
gccggtatgcgctttgtcgcggccggttttacaaacctgacccgcgatcatctggattat
cacggtgatatggcggcctatggagacgccaaggccaagctcttcgtggatcatatgccg
gccctgcaggcgatcaacctggatgatgtgttcggtcgaacgctctggcaacaactgcag
ccggtacaggctcgggtcgaggggttcgggttgagtgagccgggggcagacgtcagggtc
gaagggctggcgtttggtcccgaaggggcagaattcgcgctgcgggtcggtgatgaatgc
gcagcagttaaaacgtcactgatgggcagcttcaatgtcagcaacctgttgctctgcgcc
actttgttgcagttgatggagtatccactggcgcaggtggctgatgtgctgggcaaggtt
cagcccgtggcggggcggatgcaggctcttccagtcgttgcacacgcgccgtcggtagtg
gtggattttgcgcacacccctgacgcactggcccaggcgctgcaggcgctgcgtttgcat
cgtccctccgaggggaggctgatatgtgtgtttgggtgtggcggtgatcgcgatgccggt
aaacgtccggaaatggggcgaatcgtctctgaactggccgatcaactggtggttaccagt
gacaaccctcgttcagagtccccggctgccattattgccgacattctggcaggcgtgagt
ccagaagccgccgttcatgtagaggccgatagagcagcggccatccgttgggcgattgat
caggctgcggccgaagatctggtgctgattgcaggcaaggggcatgagcgctggcaggag
atcaatggagtcaaggagccttttgatgactgtcaacaggcttggcatgtattgcaggaa
ggagctgatgtatga
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