Marinobacterium sediminicola: LN244_06820
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Entry
LN244_06820 CDS
T07998
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
msec
Marinobacterium sediminicola
Pathway
msec01501
beta-Lactam resistance
msec01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
msec00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN244_06820
01503 Cationic antimicrobial peptide (CAMP) resistance
LN244_06820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msec02000
]
LN244_06820
01504 Antimicrobial resistance genes [BR:
msec01504
]
LN244_06820
Transporters [BR:
msec02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LN244_06820
Antimicrobial resistance genes [BR:
msec01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LN244_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
fragilysinNterm
Motif
Other DBs
NCBI-ProteinID:
ULG70520
LinkDB
All DBs
Position
complement(1486304..1489360)
Genome browser
AA seq
1018 aa
AA seq
DB search
MILSDISIKRPVLASVLSLLILLVGLIAYDRLSVREYPKIDVPVVSVETVYPGASASIIE
SQVTKIIEDSLSGIEGIDFISSISRSEKSQISVTFRLERDPDDAASEVRDRVGRVRGQLP
DDIEEPVVAKSEADAQPIIWIALSSDSHTTMEVTDYAENRVKDPLQTVPGVASVMIVGER
RYAMRIWLDPQKMAAYRVVPQDIEAALSAQNVEIPAGRIESRDREFTVLAQTDLNSVSEF
ERIIIRNDNGYPVRVRDVARVEIAPASERNTARFNGNNAVALGVIKQSTANPLDVSAGVR
EMLVQIEQNLPPGMHAQVGYDSSIFIEESIESVFTTLWQAGVLVVLVIFFFLRNLKATLI
PVITIPLSLVGAFAMMLLMDFSINTLTLLALVLAIGLVVDDAIVMLENIYRHVEAGLDPI
QAAFKGAREIGFAVIATTATLVAVFVPVAFSTGRTGKLFTEFALTLAGAVVVSTFIALSL
SPMLSSRLLHHEKRHSAIFNLIEGWLNRLSDFYQRILSRVLRSRLLAVFLLGASAAGAAY
FYQQLPQELAPTEDRGTIMTFSISPEGSSVDYVDRYARQVEKIVGEVPEGMYYFGVVGFP
SETNSLSFLRLENWDQRERKQQAITDSLTPQLYAGVTGNMSFAMNLPSLGQSIISRPVEF
IIKTTADYEQLAVITDKMMEKIAQNPGLAQPDSDLKLNKPELLVTLNRDKVSDVGIDVNT
IGRSLETFMAGRELTRYKQQGEQYDVILQIEDRYRQVPGDLTNAYVRGSNGDMIQLANLV
TVEESITAKELNHFDKLKAVKIQAMLAPGYSLGEALTFMEQSLKEVAPEALYDYAGQSRE
FKESSNTLQMTFGLALIFIFLVLSAQFESFKNPLIIMLSVPPALAGALLALHYSGGSLSI
YSQIGLITLVGLVTKHGILIIEFANQLQDRGTELRDAVVEAAALRLRPILMTTGATVLGA
LPLAVAFGAGAESRQQIGWVIVGGMLLGTLLTLFVIPTVYSYLGKRNFRQVEPDPAHR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgtctgatatcagtatcaagcgcccggtactggccagcgtattgagcctgctt
attctgctggtcggcctgatcgcttatgaccgactaagtgttcgcgaataccccaaaatt
gacgtccctgttgtttctgtggagacggtgtatcctggcgccagcgcttcaatcatcgag
tcgcaggttaccaagattatcgaggactcgctttccggcatcgaaggcatcgacttcatc
agttcgattagccgctctgaaaaaagccagatttcagtcacgttccgcctcgagcgggac
ccagacgacgctgcaagtgaagtgcgcgatcgagtcggccgagtccgcggccaattgccc
gacgatattgaggaaccagttgtcgccaaatcggaagccgacgcacagccaatcatctgg
attgcactgtcttccgacagtcacaccaccatggaagtgactgactacgccgaaaaccgg
gtcaaggatcctttgcaaaccgtacctggtgttgcaagcgtcatgatcgtcggtgagcgc
cgctacgccatgagaatctggctggacccacagaagatggcagcctatagggtggtcccg
caggatatcgaggctgcattgagcgcacagaatgtcgaaatcccggccggtcgcatcgag
agccgcgaccgtgaattcaccgttctggcccagacagacctgaattccgtatccgagttc
gagcgcatcatcatccgtaacgataacggctatccagtgcgtgttcgcgatgtcgcgcgc
gtggagattgccccggcttcagagcgcaacaccgcacgcttcaacggtaacaacgccgta
gcactgggtgtgatcaagcaatcaacggccaacccgcttgatgtatctgcaggtgtccgc
gaaatgctggtacagatcgaacagaacctgccaccgggcatgcatgctcaggtaggatat
gactcctccatcttcattgaagagtcaatcgagtcagttttcaccaccttgtggcaggcg
ggtgtactggtcgtgctggtcatcttcttcttcctgcgcaacctcaaggccacactgatt
cctgtgatcaccatccctctgtcgctggtcggtgctttcgcgatgatgctgctgatggat
ttctccatcaacacactgactctgctggcactggtgctcgccatagggctcgtggtggat
gacgccatcgttatgctggaaaacatctaccgtcatgtcgaagccgggcttgatccgatt
caggctgctttcaagggcgctcgcgagatcggctttgccgtcattgccaccacggctaca
ctggtggcggtattcgtgcccgtagccttctcaaccgggcgtaccggcaaactgtttacg
gaatttgccttgacactggcaggtgccgtcgtggtttcgacgttcattgcattgtcattg
tctccgatgctcagctcccgactgctgcatcacgagaagcgtcacagcgccattttcaac
ctcattgaaggctggctcaatcgtttgagtgatttttaccaacgcattctgagcagagta
ctgcggtctcgtctgttggccgttttcctgctgggtgccagcgcagccggtgcggcttac
ttttaccagcagcttcctcaggaactggctccgaccgaagaccgtggcaccatcatgacc
ttctcgatttctcctgagggctcatccgttgactacgttgatcgctatgcccgccaggtc
gaaaagatcgtcggcgaagtgccagagggaatgtactacttcggagtggtgggcttcccg
agtgaaaccaactcactgagtttcctgcgccttgagaactgggaccagcgtgaacgcaag
caacaggcgatcacagacagtcttacacctcagctgtatgcgggtgtgaccggcaatatg
agctttgccatgaatctgccctctttggggcaaagcatcatttcacgtccagtcgagttc
attatcaagaccactgctgactatgagcagctggcagtgattactgacaagatgatggag
aaaattgcccagaacccggggcttgcccagccggatagcgaccttaagctcaacaagcct
gaactgctggtcaccctgaatcgagacaaggtttctgatgtaggtatcgacgtaaacaca
atcggtcgcagcctggaaacctttatggcgggtcgcgagttgactcgctataaacagcag
ggcgagcagtatgacgttattcttcagatcgaagatcgttaccgccaggttccgggcgat
ctgaccaacgcctatgtgcgtggcagtaatggtgacatgatccagctggccaacctcgtc
actgttgaagaaagcatcaccgccaaggagcttaaccactttgacaaactcaaagcggtc
aagattcaggcaatgctcgcacctggttacagccttggtgaggctctgaccttcatggag
caaagtctcaaggaagtcgccccggaagcgctgtacgactatgccggccaatcgcgtgaa
ttcaaggagtccagcaacaccctgcagatgacattcggcctggctctgatattcatcttc
ctggtgctgtcagcacagttcgagagcttcaagaacccattgatcatcatgctatcggta
cctccggcactggccggagctctgctggcgctgcattacagtggcggctcattgagtatc
tatagccagattggtctgatcacgctggtcggactggtgaccaagcatggcattcttatt
atcgagttcgccaaccagcttcaggaccgtggcaccgaattgcgtgatgccgtcgttgaa
gccgccgcattacgcttgcgtcctatcctgatgacaacaggcgcaaccgtactgggagcc
ctgccgctggctgtggccttcggcgctggcgccgagtcacgtcaacagattggctgggtg
attgtcggcggtatgctgctgggcacgctcttgaccctctttgtgatcccaacagtctac
agttatttaggtaaacgcaacttccgtcaggtcgagcctgatcctgcacaccgataa
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integrated database retrieval system
