Mycolicibacterium sediminis: MSEDJ_47040
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Entry
MSEDJ_47040 CDS
T07629
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00860
Porphyrin metabolism
msei01100
Metabolic pathways
msei01240
Biosynthesis of cofactors
msei03030
DNA replication
Module
msei_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MSEDJ_47040
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSEDJ_47040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msei03032
]
MSEDJ_47040
Enzymes [BR:
msei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
MSEDJ_47040
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
MSEDJ_47040
DNA replication proteins [BR:
msei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
MSEDJ_47040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
BBY30608
UniProt:
A0A7I7QW78
LinkDB
All DBs
Position
complement(4867294..4868418)
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AA seq
374 aa
AA seq
DB search
MKVLVEADGGSRGNPGPAGYGAVVWSQDRAGVLAERKEAIGTATNNVAEYRGLVAGLEAA
AAVGATEVAVSMDSKLVVEQMSGRWRVKHPDMIPLNERARKAAAAFDRVTYSWIPRERNS
HADKLANEAMDEAAGIVVDDDNPVDESATATDPVVTSTAVRTSPAGWTGASGAPTRFLLL
RHGQTALSVQRRYSGRGNPPLTELGRAQADAAARYLGDRDDVVAVISSPLQRALITADAA
ARALGLEVTVDDDLIETDFGDWEGLTFSEAAERDPELHLRWLRDTSLPPPGGESFDDVAV
RVRRARDRIVAEYGDATVLVVSHVTPIKTVLRLALDAGEGILYRLHLDLASLSVAEFYPD
GASSVRLVNQTSYL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtgctcgtcgaggccgacgggggatcgcgcggcaaccccggtccggccggatac
ggtgccgtcgtgtggtcccaggaccgcgccggcgtgctcgccgagcgcaaggaggccatc
ggcaccgccaccaacaacgtcgccgaataccgtggcctcgtagccggtttggaggcggcc
gccgcggtcggggccaccgaggtcgccgtgtcgatggactccaagctggtcgtcgagcag
atgtcgggtcgctggcgggtgaagcacccggacatgatcccgctcaacgagcgggcgagg
aaggccgccgcggcattcgatcgggtcacgtactcgtggatcccgcgggagaggaactcg
cacgccgacaagctggcgaacgaggccatggacgaggcggcggggatagtcgtcgacgac
gacaaccccgtcgacgagtccgcgaccgccaccgatccggtcgtgacgtcgaccgcggtg
cgcacctcacccgccggttggacgggtgccagcggtgcgcccacccggttcctgctgttg
cggcacggccagacggcgctgtcggtccagcgtcgctactccggccgcggcaaccctccg
ctgaccgaactcggccgcgcccaggccgacgccgcggcgcgctacctcggtgaccgcgac
gacgtcgtggcggtcatcagttccccgctgcagcgcgccctcatcacggccgacgcggcg
gcgcgcgcgctggggctggaggtgacggtcgacgacgacctgatcgagaccgacttcggt
gactgggagggcctgaccttctccgaggccgccgaacgggaccccgaactgcacctgcgg
tggttgcgcgacaccagcctgccgccgcccggtggtgagagcttcgacgacgtggcggtc
cgcgtgcgtcgggcgcgcgaccggatcgtcgccgagtacggcgacgccaccgtgctcgtc
gtgtcccacgtgacgccgatcaagacggtgctgcggctggcgctcgacgccggtgagggg
atcctctaccggctgcacctcgacctggcgtcgctctcggtcgcggagttctatcccgac
ggggcgtcctcggtccggctggtcaaccagacgtcgtacctgtag
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