Mycolicibacterium sediminis: MSEDJ_49640
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Entry
MSEDJ_49640 CDS
T07629
Symbol
gdh
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
msei
Mycolicibacterium sediminis
Pathway
msei00220
Arginine biosynthesis
msei00250
Alanine, aspartate and glutamate metabolism
msei00430
Taurine and hypotaurine metabolism
msei00910
Nitrogen metabolism
msei01100
Metabolic pathways
msei01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
msei00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
MSEDJ_49640 (gdh)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MSEDJ_49640 (gdh)
00220 Arginine biosynthesis
MSEDJ_49640 (gdh)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
MSEDJ_49640 (gdh)
Enzymes [BR:
msei01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
MSEDJ_49640 (gdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT2
GDH_ACT3
GDH_ACT1
GDH_HM1
GDH_HM2
Motif
Other DBs
NCBI-ProteinID:
BBY30868
UniProt:
A0A7I7QWZ2
LinkDB
All DBs
Position
complement(5163510..5168369)
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AA seq
1619 aa
AA seq
DB search
MTDGGRDFDGSGEATTVLKKDPVTSLARAYLQTHQGPHGDAPAADSAVTAPITLTAGGGL
VTPALLAAHSKVGRQRAAGETNVAVYASGDQSGIGPAMQIVTDHSAMLMDSVTVLLHRLG
VAYLAIMNPVFRVRRSASGEMLDMWPAADPDAPRDGVEESWIHVQLSPSADAATVTEAAT
LLPNVLADARQVAIDSGGLNATLVGLANALDSDIAGSFSAYDRRDVAALLRWLAAGHFVL
LGYQRCAVRDGQASVEPASRLGVLRLRTDVLPQLTGEDDLLVLAQATMPSFLRYGAYPYI
VVVRENAPGGQTIEHRFVGLFTVAAMNANVLEIPLISRRVNEALALSHGDPSHPGQLMLD
IIQTVPRSELFSLSARQLLDMAKAVVDLGSRRRALLFMRGDKLAHFVSCLVYLPRDRYTT
AVRLEMQDILVRELGGLSLEYTARVSESPWALVHFTVKLPDGTSPESVDVSQENQDRIQG
LLTEAARTWGDRLIGAVKDGIIDHRHAAHYAAAFPEVYKQAFSPVDAIADIEIVEQLRDE
SVKLVFTEGSEDHAAQLTWYLGGRSASLSELLPMLQSMGVVVLEERPFTVTRADGLPVWI
YQFKISVHPSIREEADADARAATATRFADAVTAIWQGRSEIDRFNELVMRAGLTWQQVAI
LRAYAKYLRQAGFPYSQSHIETVLNGNAKTSAALVRLFEALFDPTESDTRPDAQAAAAAV
AADIEALVSLDTDRVLRAFASMIQATLRTNYFVTRAGSAREQNVLSVKLNPGLIDELPLP
RPKYEIFVYSPRVEGVHLRFGNVARGGLRWSDRREDFRTEILGLVKAQAVKNAVIVPVGA
KGGFVLKDPPLPTGDAGTDRDAQRAEGVACYRLFISGLLDVTDNVDTATGNVVSPDGVVR
RDGDDAYLVVAADKGTATFSDIANDVAKSYGFWLGDAFASGGSVGYDHKAMGITAKGAWE
SVKRHFREMGVDTQTQDFTVVGVGDMSGDVFGNGMLLSKHIRLVAAFDHRHVFLDPNPDA
ASSWTERSRMFELPRSSWDDYDRSLISEGGGIYSREQKSIPVSPQVRTALGLGADVEEMT
PPALMKAILQAPVDLFWNGGIGTYVKAETESDADVGDRANDPIRVNGNQLRAHVIGEGGN
LGVTQRGRIEFDLAGGHVNTDAMDNSAGVDCSDHEVNIKILVDALVTAGKVSPEERTELL
MSMTDEVGHLVLADNASQNDLMGTSRANSVSLLSVHARQIKELVATTGLNRELEALPAEK
EIRRRAELGLGLTSPEIATLMAHVKLALKDELLATDLPDQEVFAARLPDYFPAQLRGRFT
SDIRSHQLRREIVTTMLVNDLVDTSGVSYAYRISEDTGVGPVDAVRSYVATDEIFRVGEV
WQQIRAAGAAGVPVAVTDRMTLDLRRLIDRAGRWLLNYRPQPLAVGAEVNRFAAKVAELT
PRMSEWLRGDDRDIVVTQTRELTDKGVAEDLARMVATGLYQYSLLDVIDIADIKDRDAAE
VADTYFALMDHLGTDGLLTAVSGLARDDRWHSLARLAIRDDIYGSIRALCLDVLAVGEPD
ETGEQKIEEWELTNSSRVARARRTLTEIYGDGEKDLATLSVAARQIRSMTRTSGTGSHS
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggcggcagggacttcgacggctcgggtgaggcgacgacggtgctgaagaag
gatccggtcaccagcctcgcgcgggcatatctgcagacccatcagggcccgcacggcgac
gcgcccgctgccgactccgcggtgaccgcgcccatcaccctgacggccggcggggggctg
gttaccccggccctgctggccgcacacagcaaggtgggccgtcagcgggcggccggtgag
accaacgtcgccgtctacgcctcgggcgaccagtcgggcatcggcccggcgatgcagatc
gtcaccgaccacagcgccatgctgatggactcggtgacggtgctgctgcaccgcctgggc
gtggcgtacctcgcgatcatgaaccccgtgttccgggttcgccgcagcgcgagtggcgaa
atgctcgacatgtggcccgccgccgaccccgacgcaccgcgcgacggcgtcgaggagtcg
tggatccacgttcagctctcaccgtcggccgacgccgccacggtgaccgaggccgccacc
ctcctgcccaacgtgctggccgacgcgcggcaggtcgcgatcgactcgggtggtctgaac
gccaccctcgtcgggctggcgaacgccctcgactccgacatcgcgggcagtttctccgcc
tacgacaggcgcgacgtggcggcgttgctccgatggctcgccgcggggcacttcgtgcta
ctcggctaccagcgctgcgcggtgcgcgacggccaggcgtccgtcgagcccgcgagccgg
ctcggcgtcctacggctgcgcaccgacgtgctgcctcaactcaccggcgaggacgacctc
ctggtcctcgcgcaggcgacgatgccgagcttcctgcgctacggcgcctacccctacatc
gtcgtggtgcgcgagaacgcacccggcgggcagacgatcgagcaccgcttcgtcggtctg
ttcaccgtcgccgcgatgaacgcgaacgtgctcgagatcccgctcatctcgcgtcgggtc
aacgaggcgctcgcgttgtcgcacggcgacccgagccaccccgggcagctgatgctcgac
atcatccagaccgtcccgcgctcggagctgttctcgctgagcgcacggcagctcctcgac
atggcgaaggcggtcgtcgatctcggctcccggcgtcgcgcgctgctgttcatgcgcggt
gacaagctcgcccacttcgtgtcgtgcctggtgtacctgccgcgcgaccggtacaccacc
gcggtgcgcctcgagatgcaggacatcctggtccgcgaactcggcggactgtcgctggag
tacaccgcgcgcgtcagcgaatccccttgggctctggtgcacttcaccgtcaagctgccc
gacggcaccagccccgagagcgtcgacgtctcccaggagaaccaggaccgcatccagggt
ctgctgaccgaggccgcccgcacctggggggacaggctgatcggtgcggtcaaggacggc
atcatcgatcaccgccacgccgcgcactacgccgccgcgttccccgaggtctacaagcaa
gcgttcagcccggtcgacgcgatcgccgacatcgagatcgtcgaacagttgcgtgacgag
tcggtgaagctggtcttcaccgagggcagcgaggatcacgccgcgcagctgacgtggtac
ctgggcggcaggtcggcgtcgttgagcgagctgctgccgatgctgcaatcgatgggcgtc
gtcgtgctcgaggagcggccgttcacggtcacccgcgccgacggcctgccggtgtggatc
taccagttcaagatctctgtgcacccgtccattcgggaggaggccgacgccgatgcccgc
gcggccaccgcgacgcgcttcgccgatgcggtcaccgcgatctggcagggcagaagcgag
atcgacaggttcaacgagctggtcatgcgggcgggcctgacctggcagcaggtcgcgatc
ctccgggcgtacgcgaagtacctgcggcaggccggttttccgtacagtcagtcgcacatc
gagacggtcctcaacggcaacgcgaagacctcggcggcgctggtgcgactcttcgaggcc
ctgttcgatcccacggagtcggacacccggcccgatgcgcaggccgcggccgccgccgtc
gccgccgacatcgaggcgctggtcagcctggataccgaccgggtgttgcgggcgttcgcg
tcgatgatccaggccacgttgcggaccaattacttcgtcacccgcgcggggtccgcccgc
gagcagaacgtgctgtcggtgaagctgaaccccggtctgatcgacgaactcccgctgccg
cgaccgaagtacgagatcttcgtgtactcgccgcgggtcgagggcgtgcacctgcggttc
ggcaacgtcgcgcgcggcggactgcggtggtcggaccgtcgcgaggacttccgtaccgag
atcctcggtctggtcaaggcgcaggccgtgaagaacgccgtcatcgtgcccgtcggcgcg
aagggcgggttcgtcctcaaggatccgccgctgccgaccggtgacgccggcaccgaccgc
gacgcccaacgcgccgagggcgtcgcctgctatcggctgttcatcagcggattgctcgac
gtcaccgacaacgtcgacacggcgacggggaacgtcgtctccccagacggcgtggtccgg
cgcgacggcgacgacgcctatctggtggtcgccgccgacaagggcaccgcgaccttctcc
gacatcgccaacgacgtcgccaagtcctacggcttctggctcggtgacgcgttcgcctcc
ggcggatccgtgggctacgaccacaaggcgatgggcatcaccgccaagggtgcctgggaa
tcggtcaagaggcacttccgcgagatgggcgtcgacacgcagacgcaggacttcacggtc
gtcggcgtcggcgacatgagcggcgacgtcttcggcaatggcatgttgctgtccaagcac
attcggctcgtcgcggcgttcgatcaccggcacgtgttcctcgatccgaacccggatgcg
gcgagttcgtggacggagcgcagccgcatgttcgagctgccgcggtccagctgggacgac
tacgaccgctccctgatcagcgagggcggcggcatctacagccgtgaacagaagtccatc
ccggtcagcccgcaggtgcgtacggcgctcggtctcggcgccgacgtcgaggagatgacg
ccacccgcgctgatgaaggcgatcctgcaggcgcccgtcgacctgttctggaacggcggc
atcggcacctacgtgaaggccgagacggaatccgacgccgacgtcggcgaccgcgccaac
gatccgatacgcgtcaacgggaatcagttgcgcgcgcacgtgatcggcgagggtggcaac
ctgggcgtcacccagcggggtcgcatcgagttcgacctcgccggcggccatgtcaacacc
gacgcgatggacaactccgcgggcgtcgactgctccgaccacgaggtgaacatcaagatc
ctcgtcgacgcactggtgaccgcgggcaaggtgagtcccgaggagcgcaccgaactgctg
atgtcgatgaccgacgaggtcggacatctggtgctggcggacaacgcgtcccagaacgac
ctgatgggcacgagccgcgcgaactccgtcagcctgctctcggtgcatgcgcgtcagatc
aaggagctggtcgccacgacgggactgaaccgcgagctggaggcgctgcctgcggagaag
gagatcaggcgtcgcgccgaactgggcctcggcctcacctcaccggagatcgccacgctg
atggcgcacgtgaagttggcgctcaaggacgagctgctcgccaccgacctgccggaccag
gaggtgttcgcggcacggctgcccgactacttcccggcgcagctgcgcggccggttcact
tccgacatcaggtcccaccagctgcgtcgagagatcgtcaccaccatgttggtcaacgat
ctcgtcgacaccagtggcgtcagctacgcctaccgcatcagcgaggacaccggcgtcgga
ccggtcgacgccgtgcgcagctacgtggcgaccgacgagatcttccgcgtcggtgaggtg
tggcagcagatccgggccgccggggcggcgggggtgcccgtcgccgtgaccgaccgcatg
acgttggacctgcgcaggctcatcgaccgggccggacgctggctgttgaactaccggccg
cagccgctcgcggtgggtgccgaggtcaaccgcttcgccgcgaaggtcgccgaactgacg
ccgcgaatgtcggagtggctgcgcggcgacgaccgggacatcgtcgtcacgcagacccgg
gagctgaccgacaagggcgtggccgaggatctggcgcggatggtggcgacgggcctctac
cagtacagcctgctcgacgtgatcgacatcgcggacatcaaggaccgcgacgccgcggag
gtcgccgacacctacttcgcgctgatggaccacctcggcaccgacgggctgttgacggcg
gtctccggactcgcacgcgacgatcgctggcattcgctggcgcggttggcgattcgtgac
gacatctacggctcgatccgggcgctgtgcctcgacgtgctggccgtgggcgagcccgac
gagaccggtgagcagaagatcgaggagtgggagctgaccaacagctcgcgcgtcgcccgt
gcgcggcgcaccctcaccgagatctacggcgacggcgagaaggacctcgccaccctgtcg
gtggcggcgcggcagatccgcagcatgacgagaaccagtgggacgggcagtcattcgtga
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