Mycobacterium senriense: MTY59_00060
Help
Entry
MTY59_00060 CDS
T10222
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mser Mycobacterium senriense
Pathway
mser03030
DNA replication
mser03410
Base excision repair
mser03420
Nucleotide excision repair
mser03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTY59_00060 (ligA)
03410 Base excision repair
MTY59_00060 (ligA)
03420 Nucleotide excision repair
MTY59_00060 (ligA)
03430 Mismatch repair
MTY59_00060 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mser03032
]
MTY59_00060 (ligA)
03400 DNA repair and recombination proteins [BR:
mser03400
]
MTY59_00060 (ligA)
Enzymes [BR:
mser01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MTY59_00060 (ligA)
DNA replication proteins [BR:
mser03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MTY59_00060 (ligA)
DNA repair and recombination proteins [BR:
mser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MTY59_00060 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTY59_00060 (ligA)
MMR (mismatch excision repair)
DNA ligase
MTY59_00060 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MTY59_00060 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
BCZ20151
UniProt:
A0ABM7SGM9
LinkDB
All DBs
Position
complement(6663..8744)
Genome browser
AA seq
693 aa
AA seq
DB search
MSAAEADSVSPEVRRQWQDLAEEVREHQFRYYIKDAPIVSDADFDAMFNELLALEERHPE
LRVADSPTQLVGGAGFATEFGEAQHLERMLSLDDVFDRDELVAWNNRVETEVGKEPYYLC
ELKIDGVALALVYREGRLERAATRGDGRVGEDVTLNARTIDDVPERLSASKEFPIPALLE
VRGEAFFLLSDFEALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRKLRMICHGIGR
TEGFAPKTQHEAYTALNAWGLPVAEQTARVRGLAAVEERIGYWGEHRYDLEHEIDGVVVK
VDDVALQRRLGTTSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG
STVGLATLHNAAEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPE
CGTTLAPAKEGDADIRCPNARSCPAQLRERVFHVAGRGAFDIEGLGYEAAIALLKAGVIA
DEGDLFTLTEDDLLRTELFRTKAGALSANGKRLLDNLDKAKKVALWRVLVALSIRHVGPT
AARALATEFGDLDSIMSASTERLAAVEGVGPTIAAALTEWFTVDWHCAIVEKWRAAGVRM
ADERDTSVARTLEGLTVVVTGSLNGFSRDDAKEAILARGGKAAGSVSKKTDYVVAGDSPG
SKYDKAIELGVPVLDEDGFRKLLDEGPPEAPAE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcagcagaagccgattcggtatcgcccgaggttcgccggcagtggcaggacctc
gccgaagaggtccgtgaacatcagttccgctactacatcaaggacgcgccgatcgtctcg
gacgcggatttcgacgcgatgttcaacgagcttctcgcgctggaggagcgccaccccgag
ctgcgggtggccgattccccgacccagttggtgggcggggcgggttttgccaccgagttc
ggcgaggcgcagcacctggaacggatgctgagcctcgacgacgtcttcgatcgcgacgag
ctggtggcctggaacaaccgcgtcgagaccgaggtcggcaaggagccgtactacctgtgc
gaactcaagatcgacggggtcgccctggcgctggtgtaccgcgaaggccggctggaacgc
gccgcgacccggggtgacggccgggtcggcgaggacgtgacgctcaacgcgcgcaccatc
gacgacgtccccgagcggctgtccgccagcaaggaattcccgattccggctctgctcgag
gtgcgcggcgaggcgttcttcctgctctccgatttcgaggcgctcaacgccagcctggtc
gaagacggcaaggcgccgttcgccaatccgcgcaacagcgccgcggggtcgctgcgccag
aagaaccccgccgtcaccgcccgccgcaagctgcggatgatctgccacggcatcggccgc
accgaggggttcgcaccgaagacccagcacgaggcctacaccgcgctcaacgcctggggg
ctgccggtggccgaacagaccgcgcgggtgcgcggcctcgccgcggtggaggagcggatc
ggctactggggtgaacaccgttacgatctcgagcacgaaatcgacggcgtggtagtcaaa
gtcgacgatgtcgcgctgcagcgccggctcggcaccacctcccgcgcgccccgctgggca
gtcgcctacaaatacccgccgcaggaggcgcagaccaagctgctcgacatccgcgtcaac
gtcgggcgcaccggccgcgtcaccccgttcgccttcatgacgccggtgaaggtggccggg
tcgaccgtcgggctggccaccttgcacaacgccgccgaggtgaaacgcaagggtgtgctg
atcggcgacaccgtgatgatccgcaaggccggcgacgtgattccggaggtgctcggcccc
gtcgtcgacctgcgcgacggctccgaacgcgaattcgtcatgcccaccacgtgtcccgag
tgcggcaccacgctggcgccggccaaggagggcgacgccgacatccgctgccccaatgcc
cggtcgtgtccggcgcagttgcgggagcgggtgtttcacgtcgccggtcgcggtgcgttc
gacatcgagggactcggttacgaagcggccatcgcgctgctcaaggccggggtgatcgcc
gacgagggcgacctgttcacccttaccgaggacgacctgttgcgcaccgagctgttccgg
accaaggccggcgccctgtcggccaacggcaaacggctgctcgacaacctggacaaggcc
aagaaggtggcgctgtggcgggtgctggtggcgttgtcgatccggcacgtcgggccgacg
gccgcgcgcgccctggcgaccgagttcggcgatctggactcgatcatgtcggcgtcgacg
gagcggctggccgcggtggaaggcgtcgggccgacgatcgcggcggcgctcaccgaatgg
ttcaccgtcgactggcattgcgcgatcgtcgagaagtggcgcgcggccggcgtgcggatg
gccgacgagcgcgacaccagtgtggcgcgcacgctggaggggctgacggtggtggtcacc
gggtcgctcaacggcttttcccgcgacgacgccaaggaggcgatcctggcgcgcgggggc
aaggccgccggctcggtgtcgaagaagaccgactacgtcgtggccggcgattcgccgggg
tccaagtacgacaaggcgatcgagctgggggtgcccgtcctcgacgaggacggcttccgc
aagctgcttgacgagggcccgcccgaagccccggcggagtga
DBGET
integrated database retrieval system
