KEGG   Manduca sexta (tobacco hornworm): 115441364
Entry
115441364         CDS       T07401                                 
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1 isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115441364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msex03000]
    115441364
   04121 Ubiquitin system [BR:msex04121]
    115441364
   03036 Chromosome and associated proteins [BR:msex03036]
    115441364
Enzymes [BR:msex01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     115441364
Transcription factors [BR:msex03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    115441364
Ubiquitin system [BR:msex04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115441364
Chromosome and associated proteins [BR:msex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115441364
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     115441364
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JmjC Cupin_8 F-box LRR_4 DUF7885 JHD LRR_FBXL18 PHD LRR_At5g56370 Rubredoxin JmjC_2
Other DBs
NCBI-GeneID: 115441364
NCBI-ProteinID: XP_037292664
LinkDB
Position
9:complement(7169940..7195234)
AA seq 1025 aa
MSETLPNNKKQVPRQLRERKQRKLYSDEWALGDDEAEGGRGFSLADKLESPRFEHSGAVL
EMNGTEITVSYLQKNGFTTPLLFKEKLGLGLRVPTSNFTVNDVRMCVGSRRLLDVMDVNT
QKNIEMTMKDWQRYYDDPNKERLLNVISLEFSHTRLENYVQAPRIVRQIDWVDTVWPRHL
KDQQTESTNALDDMMYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFWLIPPT
EKNLQLYEKWVLSGKQSDVFFGDTVEKCIRVHLQAGHTFFIPTGWIHAVYTPSDSLVFGG
NFLHQFGIEKQLKIAQVEDVTKVPQKFRYPFFTEMLWYVLDRYVSALLGRSHLAPECVAA
PLAPPKDHAHLTQNELHGLKAIVMYLHQLPAGRKSVPELLSDPIALVKDVRTLVEQHRHD
KQHLAVTGIPVLKGPDDVVSGERRQSSGRGGRGGLHRAGAARARPDHANHAPRRRRTRCK
KCEACQRTDCGECVFCHDMVKFGGLGRAKQTCIMRQCLQPMLPVTASCAVCHLDGWMQTP
VAPQAKGNSGRNGPSSLRECSVCYSIVHPACVPPGGQINEDLPNSWECPTCTTMGLNHDY
KPRHFRARQKSSDIRRMSVGSDASQLSQHHNNQNKLVPPAPPVPLKSEAGSDNETKSEVP
HIKSEDEIKREEDDGVAGVGGGAEAWEPSAKKRRASDEDEAPKKQALRSHLALQLTHHSS
KVLKKPLYPVRPATTTPHAPHHAHHAPHAAGSAGSPWLDREAMLCVFAKLTPHELATCAL
VCKTWAEYSMDPSLWRSMSFVQVRVSAAQLAGIARRQPLSLGLEWCHLARRQLAWLLGRL
PALRSLSLAGSPAEAALALRSSTCPPLTALDLSFARCLDDAKLRGILAPPENSRPGGGAR
SGAEPSRLAALAVLRLPGTDITDVAMRYVVQALPKLVELDASSCARLTDAGAAQLAHHTL
QRLSLAGCRLLTEAALDHLARCPNLVRLDLRHVPLVSTQAVIKFAAKSKHNLHVKDVKLV
ELRKT
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgtcggaaacactgccgaataacaaaaaacaagttccgaggcaactgcgggaacgcaaa
cagcgcaagctttactctgatgagtgggccctcggtgatgatgaagctgaaggagggagg
gggttctccctcgctgacaaactggagagcccacgctttgaacactctggtgcagtcctc
gagatgaatggaactgaaatcacagtgtcatatctgcagaaaaatggatttactactcct
ttgctgttcaaagaaaaacttggacttggattaagggtgccgaccagcaacttcaccgtg
aacgacgtgcgcatgtgcgtcggctcgcggcgtctcctcgacgtcatggacgtcaacacg
cagaaaaatatcgagatgactatgaaggactggcagcgttactacgacgatcccaacaaa
gagcgtctgttgaacgtgatatcactggagttctcgcacacgcgtctcgagaactatgtg
caggcgccgcgtatcgtgcgccagatagactgggtggacaccgtgtggccgcgtcacttg
aaagaccaacagactgaatctaccaacgcgttggacgacatgatgtatccaaaagtgcag
aagtattgtctcatgtcggtcaagggctgctacactgatttccacattgacttcggaggc
acttccgtatggtatcacattctcagaggcgccaaagtgttctggctcatcccgccaact
gagaagaatctgcagctctatgagaagtgggtgctctctggaaaacaatcggacgtattc
ttcggagatacggttgagaaatgcattcgcgttcatcttcaagctggccacacattcttc
attccgaccggctggatccacgcggtatacacaccgagtgactccctggtcttcggaggc
aacttcctgcatcagttcggcatcgagaagcagctgaaaatcgcacaggttgaagacgtc
actaaggtgccgcagaagttccgctacccgttcttcacggagatgctgtggtacgtgctg
gaccgctacgtgagcgcgctgctgggccgctcgcacctcgcgcccgagtgcgtcgccgcg
ccgctcgcgccgcccaaggaccacgcgcacctcacgcagaacgagctgcacggactcaag
gccatagtgatgtatctacatcagttgcctgccggtcgcaagtcggtgccggagttgtta
tccgaccccatagcgttggtaaaggacgtgcgcacgttggtcgaacagcacagacatgac
aaacaacacttggccgtgacgggaatacctgtgcttaaaggtcctgacgacgtggtgtct
ggtgagcggcggcagtcgagcggccgcggcgggcgcggcgggctgcaccgcgccggcgcc
gcgcgcgcccgccccgaccacgccaaccacgcgccgcgccgcaggcgcactagatgcaag
aaatgcgaagcgtgccagcgtacggactgcggcgagtgcgtgttctgccacgacatggtg
aagttcggcggactcggccgcgccaagcaaacgtgcattatgcgacagtgtttacagcct
atgttaccggtgacggcgtcgtgcgcggtgtgtcacctggacggctggatgcagacgccg
gtcgcaccgcaggctaagggtaactctggtcgcaacggtccgtcttcgctgcgcgagtgt
tcagtttgctacagcatcgtgcatcctgcatgcgtgccgcctggaggacagatcaacgag
gacctgcctaactcgtgggagtgccccacatgcaccaccatgggactcaaccatgattac
aagccgcggcacttccgagcgcgtcagaagtcgtcggacatcaggcgcatgagtgtagga
tcagatgccagccagctcagccaacatcataataatcagaacaaattggttccaccggca
cctccagtcccgttgaaatcggaggccggttcagacaatgaaaccaaaagcgaagtacca
catatcaagtcagaggatgaaatcaagcgcgaggaggacgatggcgtggcgggcgtgggc
ggcggcgcggaggcgtgggagccttctgccaagaaacgccgcgcctccgacgaggacgag
gcgcctaagaagcaggcgctgcggtcacatctcgcgctgcagctcacacaccactcatcc
aaggtcctgaagaagccgctgtacccggtgcggcccgccaccacgacgccgcacgcgccg
caccacgcgcaccacgcgccgcacgccgccggctccgcgggctcgccctggctcgaccgc
gaggcgatgctctgcgtcttcgcgaaactcacgccgcacgagctcgccacctgtgcgctc
gtgtgcaagacctgggctgagtattctatggatccatcgctgtggcgcagcatgtcgttc
gtgcaggtgcgggtgtcggcggcgcagctggccggcatcgcgcgccgacagccgctctcg
ctcgggctcgagtggtgccacctcgcgcgacgacaacttgcttggttactgggccgcctc
ccagcgctgcggtcgctgtcactagcgggctcacccgcggaggcggcgctggcgctgcgg
tcttcgacgtgcccaccgctaaccgcgctggacctgtcgttcgcgcggtgcctggacgac
gccaagctgcgcggcatcctggcgccgccggagaactctcggcccggcggcggcgcgcgg
tccggcgccgagccctcgcgcctcgccgcactcgccgtactacggctgcctggcacagat
atcaccgacgtcgccatgcgatacgtcgtacaggcgctgcctaagttggttgagctcgac
gcgtcgtcgtgtgcgcggctgacagacgcgggcgcggcacagctggcacatcacacactg
cagcggctgtccctagcgggctgtcgactgctcacggaggctgcgctggaccacctcgcg
cggtgccccaacctcgttagactggaccttcgacacgtgccgctggtgtcaacacaagcg
gtgatcaagttcgcggccaagtccaagcacaacttgcacgtcaaggatgtgaagcttgta
gagttgcggaagacctga

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