Manduca sexta (tobacco hornworm): 115448729
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Entry
115448729 CDS
T07401
Name
(RefSeq) putative leucine-rich repeat-containing protein DDB_G0290503 isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03440
Homologous recombination
msex03460
Fanconi anemia pathway
msex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115448729
09124 Replication and repair
03440 Homologous recombination
115448729
03460 Fanconi anemia pathway
115448729
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msex01009
]
115448729
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msex04121
]
115448729
03036 Chromosome and associated proteins [BR:
msex03036
]
115448729
03400 DNA repair and recombination proteins [BR:
msex03400
]
115448729
Enzymes [BR:
msex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115448729
Protein phosphatases and associated proteins [BR:
msex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115448729
Ubiquitin system [BR:
msex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115448729
Multi subunit type E3
BRCC complex
115448729
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
115448729
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
115448729
BRCA1-A complex
115448729
BRCA1-B complex
115448729
BRCA1-C complex
115448729
BRCA complex
115448729
FA (Fanconi anemia) pathway
Downstream FA components
115448729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
115448729
NCBI-ProteinID:
XP_030032129
LinkDB
All DBs
Position
24:complement(7124522..7134325)
Genome browser
AA seq
1226 aa
AA seq
DB search
MILKGPELNKLSHLISQQVEQVTCLECCKTYVAPETALCGHTLCHLCWKKRRTCPQCSTT
VNRQSTKLNLALQNLTEHINTLGETFEKVFNIKLDEFMLDTPGEFASRDDPSKNVKEWLA
SSQNHFSAPITPSEQASQEKSPVAELQVQSKVLVHTSTVVLHKPTKVVCATIAQDDWDKI
EPMTETVDKDKENVVGPIDTDLFDINDNSYTMQNPRRSLRKKDGKIIDFINIQSQSSSEK
PDSKEKNTENDNKTSSIKQNWNNVKRMRKEFSKLNKKNKNKLNVSIEMYKKTQQSSNKSN
IDIPVAVSEQVLEIDDNTPNGENERNSDLHTADNLPQRDCSSNPSKAIYMLDNPDRSDNN
MKKHLEKNTNKSSLINAKSITTAKQIVISSHTPSQVNNKQFQESSNNFNEPNKSKIAFIK
KAPLSHIHNKHTCNNATTYHYIDVKPGGTNSSNDIQISIKIGDRVTNIIINKDKNDSPLK
ASTDREVQVSLGPYKISASNNNCLEVEDQTKSKINNEMAQKIVINTDNKLLSTDKAGTPA
NKSISTKKNTASAETATAQFEITESVERELSKIMECENINDEQCNFCNISNNKTTTQVGP
TIHLDKSKNINILSDIQINNYKTKAQDENVQLLQNTNKGTSEILLPSIHTNKYKNADKRS
RETTTDCDLPKSKKMKTISEDIGEMCITNSHTSHCDKNDKNESELVTYEAVIDQVFGNID
KDIENEHRGTPTATSKIGTVGKDVRTLTQKSKIVSIPGSNQSESFTNIKDYYDQKESENM
FSLGEKDNENGDRTLKNIVRESTQQQVHNLLTPVMCRNLELQEYTPHIDDKDDESDKSIV
EDTPQKNVSYSKLRQKNESSINKLEQKLNPPEKDEKKTVVKQKSRSVINLTESVEFNKSN
KDGTIIECVTKKHALETPLTINKFVDHIKHKSTPVARKSLNFENENTEDEDPEITLCPTS
DVAKNTQEKEFMTKAFENTPESPRMRSLALKNLNTANNKRLCIAGSCLTSSEITKLKNLC
ASLKWVYVDKYTKDVTHLVVGVDEDYKSQRSVKYMSALAAGKWIVSFEWVEKCLKAMRWV
DEVKFEVLDSTGEPGPKRSRIAKRKLFQGITFYCMPPFSVLDVNTLKTMLEAAGGRVVNE
IKQVRVTEDTPGPALLLAEPENTQEDRFIYLTVELGIVPVNYEWVLNSLGNYTVGSLQDL
LLCPASLLPKKTSQWPSCFFTREYDE
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgattctcaaagggccggagctcaataagttatcgcatttgatatcccagcaagttgaa
caagtaacttgtcttgaatgttgtaaaacatatgtagcccccgaaacagctttatgtggg
catacattgtgccatttatgttggaaaaaaagacgcacttgtcctcagtgttcaactact
gtgaaccgtcaaagcactaaattaaatttggccttacaaaaccttactgaacacatcaac
acacttggtgaaacatttgaaaaagttttcaacatcaaattggatgagtttatgctcgac
acacctggggagtttgcctctagagatgatccttcaaaaaatgttaaagaatggttagcc
agttcacaaaatcacttttctgcaccaattacaccttctgaacaagcatcgcaagaaaaa
tcacctgttgcagagttacaagtacaaagtaaagtcctagtccatacaagtactgtggta
ctgcacaaacctacaaaggtagtttgtgcaaccattgcacaagatgattgggataaaata
gaacctatgaccgaaacagttgataaagataaagaaaatgttgtaggccctattgacact
gatctatttgatataaatgataactcttatacaatgcaaaatccacgaagaagtttaagg
aagaaagatggtaaaatcattgattttatcaatatacaatcacaatcatcatctgaaaaa
ccagatagtaaagaaaaaaatactgaaaatgataataagacaagtagtataaaacaaaac
tggaataatgttaaaaggatgaggaaggaatttagtaaacttaacaaaaaaaataagaac
aaactgaatgtgtctatcgaaatgtataaaaaaactcaacagtcaagtaacaaatcaaat
attgatatacctgttgctgtgtcagagcaggtattagaaattgatgataatacacccaat
ggtgaaaatgaaaggaacagtgatttgcatactgctgataaccttcctcaaagggattgc
agttctaatccttctaaagcaatttacatgctggataaccctgacagaagtgacaacaat
atgaaaaagcacttagaaaaaaacacaaataaatcatctttaattaatgcaaaaagtatt
actaccgctaaacaaattgttatatcatcccatacaccatcacaggtaaataataaacaa
tttcaagaaagtagtaataattttaatgaaccaaacaaatctaagattgcatttataaag
aaagctcctctaagccatatacataacaaacatacctgtaacaatgcaactacttatcat
tacatagatgtaaagccaggaggtacaaacagtagtaatgatattcagatttctattaaa
ataggagatagggtgacgaacattattattaacaaggataaaaatgattcaccattaaaa
gctagtactgaccgtgaagtccaagtgtcattaggaccttacaaaatttctgcaagtaat
aataactgtctagaagtagaagaccaaacaaaaagtaaaattaataatgaaatggcacag
aaaattgtaataaatactgacaataaacttttatctactgataaagcaggtactcctgca
aacaaatcaatatctacaaaaaaaaatactgcatctgctgagacagcaacagcacagttt
gaaattactgagagtgttgaacgagaattgtcaaaaataatggagtgtgaaaatataaat
gatgaacaatgtaacttttgtaatattagcaataataagaccactactcaagttggtccg
acaatacatttggacaagagtaagaatataaacattttgagtgatatacaaattaataat
tataaaacaaaggcacaggatgaaaatgtacaacttttacaaaatactaataaaggaact
tcagaaatacttttaccctctattcatacaaataaatataaaaacgcagacaaaagaagc
agagaaaccactactgactgtgatttaccaaaaagcaagaaaatgaaaactatttctgag
gatattggagaaatgtgcattactaactctcatacatctcattgtgataaaaatgataag
aatgaaagtgaacttgtaacttatgaagctgttattgaccaagtttttggtaatattgat
aaggatattgaaaatgaacaccgaggtactccaactgcaacatcaaaaataggtacagtt
ggaaaagatgtaagaacactaacacaaaaatccaaaattgtgagcattccaggctcaaat
cagtctgaatcgtttacaaacattaaagattactacgatcaaaaagagagcgaaaatatg
ttctcattaggcgaaaaggataatgaaaatggtgatagaacactgaaaaatattgtccgc
gagtctacgcaacagcaagtacataacttactgacaccagtcatgtgtcgaaatttagag
ctgcaggaatacactccacatattgatgacaaagatgatgaatctgataaaagcatagtg
gaagatacaccacaaaagaatgtatcttattctaaacttcgacaaaagaatgaatcgtca
ataaacaaactagaacagaaactaaatccaccagaaaaggatgagaaaaaaacagtagtc
aagcaaaaatctagaagtgttattaatttgacagagagtgtagaatttaataaaagcaat
aaggatggaaccattattgaatgtgtcacgaaaaagcatgcattggaaaccccactgact
ataaacaaatttgttgatcacattaaacacaagtctacaccagttgccagaaagtcgtta
aactttgaaaatgaaaatacggaggatgaggatcctgagataacactttgtccaacgtct
gatgtggcaaagaacacacaagagaaagaatttatgactaaagcctttgaaaacactccg
gaatctccaagaatgagatcgctggcattgaaaaacctgaacactgctaacaataaaaga
ttgtgtatagctggctcttgcttaacatctagtgaaatcacaaaattgaagaatttatgt
gcgtcacttaaatgggtttacgttgataaatatacaaaagatgtcactcatctagtagtg
ggagttgatgaagactacaagtcgcaaagatctgtgaagtatatgtctgcgttggcagct
ggcaagtggattgtttcatttgaatgggtggaaaagtgtttgaaagctatgagatgggtt
gatgaggtaaagttcgaggtccttgacagtactggcgagccaggaccgaagcgctcacgc
atcgccaaacggaaactgtttcaaggcatcacgttctactgcatgccgccgtttagcgtg
ctcgacgtgaacacattgaagacaatgttagaagccgcaggcggccgcgtagtaaacgaa
attaaacaggtaagagtgaccgaggatacgccaggacctgctctgttactagcagagccg
gaaaacacccaggaggatcgatttatatatcttacagtggagctcggtattgtaccagtc
aactacgagtgggtgttaaattccctcggaaactacacagtgggatcattgcaagattta
ttactgtgccccgcatctcttttgcccaaaaaaacgtcgcaatggccgtcttgcttcttc
actcgcgaatatgacgaatga
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integrated database retrieval system
