Manduca sexta (tobacco hornworm): 115451364
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Entry
115451364 CDS
T07401
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115451364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115451364
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
115451364
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115451364
NCBI-ProteinID:
XP_030035511
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All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MTEYVPVSEGELDEPIELPTEEDGSLLLSTVSAQFAGACGLKYRASGRLRGVRLVDERLS
PPAEGWPAHRYWCAFPRIDPPPPRPRCSDLIVLGLPWKTGEEAVREYFGAFGELLMVQVK
RDARTGLSKGFGFIKFAEYEAQVRALGRRHMIDGRWCDVRIPNGKEGAAAAHRKVFVGRC
TESLTADDLREYFAAFGQVTDVFVPRPFRAFSFVTFLDPEVARSLCGQDHIIKGVSVNIS
SASPKRAGGAGGSGGGASVGGATAGAGAGSGARAGWPTLGWAPDAWPLPPTHLPIDSKPY
LKYE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacggagtacgtgccggtgagcgaaggcgagctggacgagcccatcgagctgcccacc
gaggaggatggctcgctgctgctgtccacggtgtcggcgcagtttgcgggcgcgtgcggg
ctcaagtaccgtgccagcggacggttgcgtggcgtacggctggtggacgagcggctgtcg
ccgccagccgagggctggccggcacaccgctactggtgtgcgttcccgcgcatcgacccg
ccgccgccgcgcccgcgctgctctgacctcatcgtgctggggctgccgtggaagacgggc
gaggaggcggtgcgcgagtacttcggggctttcggcgaactcctgatggtgcaggtgaag
cgtgacgcacgtaccggcctctccaaggggttcgggttcatcaagtttgccgaatacgag
gcgcaggtgcgagcacttggccgccggcacatgatcgacggccgctggtgcgacgtgcgt
atccccaacggcaaggaaggagccgcggcggcacaccgcaaggtgttcgtcggccgctgc
actgagagcctcaccgcggacgacctacgcgaatattttgccgcgttcggacaggtcacc
gacgtgttcgtgccgcgaccatttcgcgcgttcagttttgtcacatttctggacccggaa
gtggcgcgctcgttatgtggtcaggaccacatcatcaaaggcgtatcagtgaacatctcg
agtgcatcgccaaagcgtgcgggcggcgccggcggcagtggcggtggcgccagtgtcggg
ggcgcgactgccggcgccggcgcaggtagcggagcgcgcgctggttggcccacactgggc
tgggctcccgacgcgtggccactgccacctacacatctgcccatcgactccaagccctac
ctcaagtacgagtga
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integrated database retrieval system