Mycolicibacterium smegmatis INHR2: LI98_24980
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Entry
LI98_24980 CDS
T03432
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
msh
Mycolicibacterium smegmatis INHR2
Pathway
msh00020
Citrate cycle (TCA cycle)
msh00630
Glyoxylate and dicarboxylate metabolism
msh00785
Lipoic acid metabolism
msh01100
Metabolic pathways
msh01110
Biosynthesis of secondary metabolites
msh01120
Microbial metabolism in diverse environments
msh01200
Carbon metabolism
msh01210
2-Oxocarboxylic acid metabolism
Module
msh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
msh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LI98_24980 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
LI98_24980 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LI98_24980 (kgd)
Enzymes [BR:
msh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LI98_24980 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
LI98_24980 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
LI98_24980 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
LI98_24980 (kgd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AIU23335
LinkDB
All DBs
Position
5148061..5151744
Genome browser
AA seq
1227 aa
AA seq
DB search
MSSSPSPFGQNEWLVEEMYRKFRDDPSSVDPSWHEFLVDYSPEPTTDSASNGRTTTAAPV
TPPTPAPAPAPEPKAAPKPAAKTEAKPAKPAKSATPAKGDESQILRGAAAAVVKNMNASL
EVPTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFA
VVDGKPTAITPAHTNLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARD
GKLTAEDFSGVTISLTNPGTLGTVHSVPRLMQGQGAIIGAGAMEYPAEFQGASEERIADL
GIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLDDDFFDEIFRELGIPYEPVRWRTDNP
DSIEDKNARVIELIAAYRNRGHLMADIDPLRLDNTRFRSHPDLDVNSHGLTLWDLDREFK
VDGFAGVQRKKLRDILSVLRDAYCRHVGVEYTHILEPEQQRWIQERVETKHDKPTVAEQK
YILSKLNAAEAFETFLQTKYVGQKRFSLEGAETVIPMMDAVIDQCAEHGLDEVVIAMPHR
GRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLT
ANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNL
ALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWV
ARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDTKRGSRKAYTEALIG
RGDISMKEAEDALRDYQGQLERVFNEVRELEKHEIEPSESVEADQQIPSKLATAVDKAML
QRIGDAHLALPEGFTVHPRVRPVLEKRREMAYEGRIDWAFAELLALGSLIAEGKLVRLSG
QDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEY
GYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQGPDH
TSGRIERFLQLWAEGSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVS
DIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKIYYELAARKAKENREDVAIVRI
EQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEILPDHFTGLKRISR
RAMSAPSSGSSKVHAVEQQEILDTAFG
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagttcaccttcaccattcggacagaacgagtggctggtcgaggagatgtatcgc
aaattccgcgatgacccctcctcggtggatcccagttggcatgaatttctggtcgattac
tcccccgagcccaccaccgacagtgcctccaacgggcgcaccaccaccgcggctcccgtg
acgccgccgactccggcgcctgcgcccgcgcccgagcccaaggccgcgcccaagcccgcc
gcgaagaccgaggccaagcccgccaagccggcgaagtcggccaccccggccaagggcgac
gaatcgcagatcctgcgcggcgccgcggcagcggtggtcaagaacatgaacgcctcgctg
gaggtgccgaccgcgacgagcgtgcgcgccatcccggcgaagctgatgatcgacaaccgc
gtcgtcatcaacaaccacctcaagcgcacgcgcggcggcaagatcagcttcacccacctg
ctgggctacgcgatcgtgcaggcggtcaagaagttcccgaacatgaaccgccacttcgcg
gtcgtcgacggcaagcccaccgcgatcacgcccgcccacaccaacctgggcctcgcgatc
gacctgcagggcaaggacggcaaccgctcgctcgttgtcgcggcgatcaagcgttgcgag
acaatgcgattcggccagttcatcgccgcatacgaggacatcgtacgtcgcgcgcgtgac
ggcaagctcaccgccgaggacttctcgggcgtcaccatctctctcaccaatcccggcact
ctgggcaccgtccactcggtgcccagactcatgcagggacagggtgcgatcatcggcgcg
ggcgccatggagtaccccgccgagttccagggcgccagcgaggagcgcatcgccgacctg
ggcatcggcaagctgatcacactgacgtcgacctacgaccaccgcatcatccagggtgcg
gagtccggcgacttcctgcgcaccatccaccagctgctgctcgacgacgacttcttcgac
gagatcttccgcgagctgggcatcccgtacgagcccgtgcgctggcgcaccgacaacccc
gactcgatcgaggacaagaacgcgcgcgtcatcgagctcatcgcggcgtaccgcaaccgc
ggtcacctgatggccgacatcgatccgctgcgcctggacaacacccggttccgcagccac
ccggacctcgacgtcaacagccacggcctgaccctgtgggacctcgaccgcgagttcaag
gtcgacgggttcgccggtgtgcagcgcaagaagctgcgcgacatcctctcggtgctgcgc
gacgcgtactgccgccacgtcggtgtcgagtacacccacatcctcgagcccgagcagcag
cgctggatccaggaacgcgtcgagaccaagcacgacaagccgacggtcgccgagcagaag
tacatcctgtccaagctcaacgccgccgaggccttcgagaccttcctgcagaccaaatac
gttgggcagaagcgcttctcgctcgaaggcgccgagaccgtcatcccgatgatggacgcc
gtgatcgaccagtgcgccgagcacggtctcgacgaggtggtcatcgcgatgccgcaccgc
ggccgcctcaacgtgctcgccaacatcgtcggcaagccctacagccagatcttcagcgag
ttcgagggcaacctcaacccgtcacaggcgcacggctccggcgacgtgaagtaccacctg
ggcgccaccggcacctacatccagatgttcggcgacaacgacatcgaggtgtcgctgacc
gccaaccccagccacctcgaagccgtcgacccggtgctcgaaggtctggtgcgcgccaag
caggacctgctcgacacgggcgaggagggctccgacaaccgcttctccgtcgtgccgttg
atgctgcacggcgacgcggccttcgcgggccagggcgtggtggccgagacgctcaacctc
gcgctgctgcgcggctaccgcacgggcggcacgatccacatcgtcgtcaacaaccagatc
gggttcaccacggcgcccacggattcgcgctccagcgagtactgcaccgacgtggccaag
atgatcggcgcgccgatcttccacgtcaacggcgacgatcccgaggcgtgcgcctgggtg
gcgcgcctggccgtcgacttccggcaggcgttcaagaaggacgtcgtcatcgacatgctg
tgctaccgccgccgcggccacaacgagggcgacgacccgtcgatgacgcagccctacatg
tacgacgtcatcgacaccaagcgcggctcccgcaaggcctacaccgaggccctgatcggc
cgcggtgacatctcgatgaaagaggccgaggacgccctgcgcgactaccagggccagctc
gagcgggtgttcaacgaggtccgcgagctcgaaaaacacgagatcgagcccagtgagtcc
gtcgaggccgaccagcagatcccgagcaagctcgccacggccgtcgacaaggcgatgctg
cagcgcatcggcgatgcgcacctcgcgctgcccgagggcttcacggtgcacccgcgtgtg
cggccggtgctggagaagcgccgcgagatggcctacgagggccgcatcgactgggcgttc
gccgagctgctcgcgctcggctcgctcatcgccgagggcaagctcgtgcggctttcgggt
caggacacgcagcgcggcacgttcacacagcgccacgcggtgatcgtcgaccgcaagacc
ggcgaggagttcacgccgctgcagctgttggccaccaaccccgacggcacacccaccggc
ggcaagttcctggtgtacaactccgcgctgagcgagttcgccgcggtgggcttcgagtac
ggctactcggtgggcaaccccgacgccatggtgctgtgggaggcgcagttcggcgacttc
gtcaacggcgcgcagtcgatcatcgacgagttcatcagctcgggcgaggccaagtggggt
cagctgtccgatgtcgtgctgctgctgccgcacggccacgagggccagggccccgaccac
acctcgggacgcatcgagcgcttcctgcagctgtgggccgagggttcgatgaccattgcc
atgccgtcgacgccggcgaactacttccacctgctgcgcaggcacggcaaggacggcatc
cagcgtccgctgatcgtgttcacgcccaagtcgatgctgcgcaacaaggccgccgtcagc
gacatccgcgacttcaccgagagcaagttccgctcggtgctcgaggagccgatgtacacc
gacggtgaaggcgaccgcaacaaggtcacgcgcctgctgctgaccagcggcaagatctac
tacgagctcgccgcgcgcaaggccaaggagaaccgcgaggacgtcgcgatcgtgcgtatc
gagcagctcgcgccgctgccgcggcgcaggctcgccgagacgctcgaccggtacccgaac
gtcaaggagaagttctgggtgcaggaggagccggccaaccagggcgcatggccgtccttc
gggttgacgctccccgagatcctcccggaccacttcacgggcctcaagcgcatctcgcgg
cgcgccatgtcggcgccgtcgtcgggttcgtcgaaggtgcacgccgtcgagcagcaggag
atcctcgacacagcgttcggctga
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