Methanobrevibacter smithii: Msm_1055
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Entry
Msm_1055 CDS
T00539
Name
(GenBank) coenzyme PQQ synthesis protein, SAM family
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi00790
Folate biosynthesis
msi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Msm_1055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msi03016
]
Msm_1055
Enzymes [BR:
msi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Msm_1055
Transfer RNA biogenesis [BR:
msi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Msm_1055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ABQ87260
UniProt:
A5UM32
LinkDB
All DBs
Position
complement(1015956..1016654)
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AA seq
232 aa
AA seq
DB search
MKAPIIEIFSSFQGEGLFIGQRQIFVRFAGCNLNCSYCDTNDSKSEKSGKLMTVDDVLAA
IENVRTPDCHVISFTGGEPSLYPEFINEVARQTDLKILLETNGTLPEKIDFIEKLDIVSL
DIKLPEHFNNDFNEDIFINEIKSVNLLMAKSIMLYCKVVVLPSTKTNLIQEVMEKLSNNI
SSKNKLQIIIQPSSPLEDWGNSNSKLFEFSEIVGQYFEVSTIPQVHKILNIE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccaataatcgaaattttttcaagttttcagggggaaggccttttcattggt
caaagacaaatctttgttagatttgcaggatgtaacttaaactgcagctattgcgatact
aatgatagcaaatctgaaaaatcaggtaaattaatgacagttgatgatgttttggcagct
attgaaaatgttagaactcctgattgtcatgtaatctcttttactggtggggaacctagt
ttatatcctgaatttattaatgaagttgctcgtcagactgatttgaaaattcttttagaa
acaaacggcactttgcctgaaaaaattgatttcattgaaaaattagacattgtatcattg
gatattaaattacctgaacattttaacaatgattttaatgaagatatttttatcaatgaa
atcaaatcagtaaatttattaatggcgaagtctataatgttatattgtaaagtagttgta
ttgccttcaacaaaaacaaatttaattcaagaggtaatggaaaaattatctaataatatt
tcaagcaaaaacaaacttcaaataattatccagccatctagtcctttagaggattggggt
aattctaattctaaattatttgaattttcagaaattgttgggcaatattttgaagtatcc
accattccacaggtacacaagatattgaatattgagtga
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