Mycobacterium simiae: MSIM_27990
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Entry
MSIM_27990 CDS
T07396
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
msim
Mycobacterium simiae
Pathway
msim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSIM_27990 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msim03400
]
MSIM_27990 (nth)
Enzymes [BR:
msim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSIM_27990 (nth)
DNA repair and recombination proteins [BR:
msim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSIM_27990 (nth)
Prokaryotic type
MSIM_27990 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BBX41348
LinkDB
All DBs
Position
3001166..3001930
Genome browser
AA seq
254 aa
AA seq
DB search
MSDAKPDSALARRWASETRAALVRRARRMNRTLAQAFPEAHCELDFTTPLELTVATILSA
QSTDKRVNLTTPALFRRYRSAVDYAQADRDELENLIRPTGFFRNKASSLIGLGQALVERF
DGEVPSTMEELVTLPGVGRKTANVILGNAFDIPGITVDTHFQRLVARWRWTAEKDPVKIE
HAVGELVERREWTMLSHRVIFHGRRVCHARKPACGVCVLAKDCPSYGLGPTEPALAAPLV
QGPEAEHLLSLVGL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgccaagcctgattcggcactcgcgcgccgctgggcctccgaaacccgcgcc
gcattggtacggcgcgctcgtcgaatgaatcgcactctggcgcaagcctttccggaggcg
cattgcgagctggatttcacgacgccgttggagctcacggtggccaccatcctgtccgcg
cagagcaccgataaacgggtgaatctgacgaccccagcgctgttccggcgatacaggtcg
gccgtggattatgcgcaggctgaccgcgacgagctggaaaacctcatccgccccactggt
ttcttccgtaacaaggccagctcgttgatcggcctcggccaggcgctcgtcgagcgcttc
gacggcgaggtgccctcaactatggaagaactggtgaccctgcccggcgtcggacgcaaa
accgccaacgtcatcctcgggaatgccttcgacatccccgggatcaccgtggacacccat
ttccagcggctggtggcgcgctggcggtggaccgcggaaaaggacccggtcaagatcgaa
cacgccgtcggcgagctggtcgaacgccgcgaatggaccatgctcagccaccgcgtcatc
tttcacggccgacgcgtgtgtcacgcccgcaagccggcgtgcggcgtctgcgtgctcgcc
aaagactgcccgtcgtacggtctcggccccaccgagccggccctggccgcacccctggta
cagggtccggaagccgaacatctgctctcgctggtcggtctgtaa
DBGET
integrated database retrieval system
