Magnolia sinica: 131224765
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Entry
131224765 CDS
T09699
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
msin
Magnolia sinica
Pathway
msin04075
Plant hormone signal transduction
msin04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131224765
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
131224765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msin03000
]
131224765
Transcription factors [BR:
msin03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
131224765
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
131224765
NCBI-ProteinID:
XP_058076092
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Position
14:complement(1467250..1472153)
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AA seq
700 aa
AA seq
DB search
MPYSEFHQMAKGKLDSTKLKMNNCPTDLSFPSDHEFLELLWENGQIVMQGHCSRTRKSSM
SPGVSSSHHSGTVQEKDVGDAVFPKTTRYGRLESDVNGVSSSVPSAPVGMAQDDEMVPWL
NYPIEESLQNDYCSEFFSELSGPNLKSLSVQNSTVPVEGKGRCGQVIRDTNIVSAHGREK
QEIRKTLKAVGSDAWPVRIRSSPLFLSSQQHPASDPKPTSRASASLANYNNNTQQAHCRN
SSPTETQVAAAGMLSSKMLKKDPSPTRPSQPSNNTGLMNFSHFSRPVALVKANLQSIGSA
AVGASGVDKFKGSDKVSVTSSNPIEPSVVESSSCLQGTATGQLVSVLAKVDLKSPSITPQ
EVASAKKSEKVCQEDEPTNHRSPDHLCQSSSFAASVAEGQLESEKAFRPAAASSSVCSGN
SSGGMLNYTKHGPKRKCRDIEESGYQSEDADDESVDVRKPTKCPKRSRAAEVHNLSERRR
RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQMQVQIMSMGTGLCMPPMMLPAG
IQNLRGPAIPHFPHMGVGMGMGMGMGFGMGMPDMGCSSSYPLIPMLQMHGPQFPCSSIPG
PTSLHGLPASSLQMFGIPGQGLPLSLPRAPFIPLSGFATKPPSAPDFSVAACPMPVPDSV
PPSSSKDQIQDVSLQTMHKTNTECLQTQPSTQTLTDDRPS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgccttactctgaattccatcagatggccaagggaaagctcgattcaaccaaattgaag
atgaacaactgcccgaccgatctttcttttccgtctgatcatgaattcctcgaactgttg
tgggagaatggtcagattgtgatgcaaggtcattgcagtaggactagaaagagctccatg
tcacctggtgtttcttcatctcatcacagcgggacagttcaagagaaagacgtcggcgat
gctgtttttccaaagacgacgaggtacggaaggctggaatctgatgtgaatggcgtctca
tcatcagttccttcagcccctgttgggatggcacaagacgatgagatggtcccatggctg
aattacccaattgaagaatctttgcagaatgattactgttcagaattcttttctgaatta
tcaggccccaatctgaaatctctgtcggtgcagaatagtaccgttcctgttgaaggaaag
ggccgctgcggtcaggttattagggacacaaacatagtttcagcacatggccgtgagaag
caagaaattagaaagacattgaaagccgttgggagtgacgcctggcctgttagaattagg
agcagcccattatttctgtcgtcacagcaacacccagcttcagacccaaaacctacatcg
agagcttcagcttcccttgccaattataacaataacacacaacaagcacattgcaggaat
tcaagtccgactgagacgcaggtggcggcagctgggatgcttagttcgaagatgctgaag
aaagatccatcacctacaaggccatcgcagcctagtaacaataccgggttgatgaacttc
tcccatttctcaagacccgtagctcttgttaaagccaatctgcagagcattggttctgcg
gctgtgggcgcctcaggtgtagataagttcaagggcagtgacaaggtttccgtcaccagt
agtaatcccatcgaaccttcggtggtcgagtccagtagctgtttgcaaggcactgccaca
ggccaactagtttcagtgctggcgaaggttgatttaaagtcacccagtataactccccag
gaggtggcctccgccaagaagtcagaaaaggtttgtcaggaagatgagcccacgaatcat
aggtccccagatcacctttgtcagagttcaagcttcgcagcgagcgttgctgagggacag
ctagagagcgaaaaagctttcaggcctgcagcagcatcttcttctgtatgttcaggcaac
agttctgggggaatgttgaattataccaaacatgggccgaagaggaaatgtcgggacata
gaagagtctggataccagagcgaagatgctgatgacgaatctgtggatgtaaggaagccg
actaagtgccccaagcgaagccgcgctgcagaagtgcataatttatcagaaagaaggcga
agggataggatcaacgagaagatgcgtgcgttacaggaactcatacctaattgcaataag
gtggacaaagcttcaatgctggatgaggccattgagtatctgaaaacccttcagatgcaa
gtacagatcatgtccatgggaactgggctttgtatgcctccgatgatgttacctgcagga
atacaaaacttacgtggaccggcaattcctcatttcccacacatgggtgtagggatggga
atgggcatgggtatgggttttgggatgggaatgcctgacatgggctgttcctctagctac
cctttgattccaatgctccaaatgcatggcccacaattcccttgctcatcgattccagga
cccacaagtttgcacgggttgcccgcttcgagccttcagatgtttggaatcccagggcaa
ggacttcccttgtctcttcctcgtgcacccttcattcctttgtcagggtttgcaacaaag
ccaccttcggcgcctgatttctcagtggcagcttgtcctatgcctgttccagattcggtt
ccaccttcaagttcaaaggaccagattcaagacgtaagcctacaaacaatgcataaaaca
aacactgaatgcttacagactcagccatcaactcagactttgactgatgaccgtccgtcc
tag
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