KEGG   Magnolia sinica: 131227046
Entry
131227046         CDS       T09699                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
msin  Magnolia sinica
Pathway
msin03420  Nucleotide excision repair
msin04120  Ubiquitin mediated proteolysis
msin04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    131227046
   04120 Ubiquitin mediated proteolysis
    131227046
  09124 Replication and repair
   03420 Nucleotide excision repair
    131227046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msin04121]
    131227046
   03400 DNA repair and recombination proteins [BR:msin03400]
    131227046
Enzymes [BR:msin01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     131227046
Ubiquitin system [BR:msin04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   131227046
  Multi subunit type E3
   SCF complex
    Ring finger protein
     131227046
   Cul2 complex
     131227046
   Cul3 complex
     131227046
   Cul4 complex
     131227046
   Cul7 complex
     131227046
   Cul8 complex
     131227046
   Cul9 complex
     131227046
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      131227046
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      131227046
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-C2H2_fungi zf-RING_16
Other DBs
NCBI-GeneID: 131227046
NCBI-ProteinID: XP_058078723
LinkDB
Position
15:complement(73793699..73807589)
AA seq 122 aa
MASMETDVNMAPAGEGPCITGPSSSSSCCSKKPKRFEIKKWNAVALWAWDIVVDNCAICR
NHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKY
GH
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcgagtatggagacggacgtgaacatggcgccagcaggagaagggccgtgcattaca
ggcccatcttcttcttcttcttgctgctccaagaagcccaagcgctttgaaatcaagaag
tggaatgcggtcgctctttgggcctgggatattgtcgtcgacaactgcgcaatttgcagg
aaccatatcatggatctctgcattgagtgccaggcgaatcaggcaagcgcgacaagcgag
gagtgcacagtggcatggggtgtatgcaatcatgcgtttcatttccactgcatcagtcga
tggctcaagacccgccaagtttgcccactggataacagcgagtgggagtttcagaagtac
gggcactaa

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