Magnolia sinica: 131230212
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Entry
131230212 CDS
T09699
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
KO
K12126
phytochrome-interacting factor 3
Organism
msin
Magnolia sinica
Pathway
msin04075
Plant hormone signal transduction
msin04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131230212
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
131230212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msin03000
]
131230212
Transcription factors [BR:
msin03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
131230212
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
131230212
NCBI-ProteinID:
XP_058082014
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Position
17:complement(1266278..1273200)
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AA seq
735 aa
AA seq
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MPYSAIYPLAKVKPESTQSKMTNCSAELAFSPENEFVELLWENGQIVMQGQSSRTRKSSM
LTVFPSDAPKVYEKDDGDAILPKIGRYSNLEAVVNDFSSSGPSGHPGLVQDDEMVPWLNY
PIDDSLENDYSEIFPENFPELSGVDLNSLSAQNNAVPIDRSGSYGPEVRDTHAVSTHGSV
NQEHKNASRVGGGGSDPTRNRSSQVFSSQQCPISAQNIRPRVSDFSTNNNINPHQAPCLN
SIQKPVSAAGISNLKMHKKDLPSTRPPQPSNNVGLMNFSHFSRPAALVRANLQSIGAAVT
GSPGVDRLRSSDKVSVTGSNPIEPSVVESTSGSRSVAGILHQLVSVPAKMDLNPPEKCSK
VPVSFEQSEAVCPEDASKNNRSPDRMLCQSSSFAASVALGRTESEKAFEPVVASSSVCSG
NSAGGASNDPKHGMKRKSREIEDSEYQSEDVEDESVDVRKPGKNAKRSRAAEVHNLSERR
RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGSGLCMPPMMLPA
GIQHMRPPPMPHFPPMGVGMGMGMGFGMGMLDMSCSSGRPMIPVHPMHALQFPCSSIPGP
PNLHGMPGAGLQMFGIPGQGLHLSLPHPPFIPLSGFPTKEASVPPVSGSAIPVSVPDSAP
PPSTMDHTRDKSSQMMHKASDGCPQTQTSTQATKECFEQSDMVQQNSQTPANLDGDEAIN
NTICGSGPPSIRTST
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgccttactccgcaatttatcccttggcaaaggtgaaaccggaatcgacccaatcgaag
atgactaattgctctgccgagcttgctttctcgcctgagaatgaatttgtcgagctgcta
tgggaaaatggtcagattgtgatgcaaggccagtccagtagaaccagaaagagctccatg
ttgactgttttcccctccgatgctcccaaggtctacgaaaaggacgatggagatgccatt
cttccaaagattggaaggtatagtaatttggaggcggttgtgaatgatttctcatcctca
gggccttcaggtcatcctggtctggttcaagatgatgagatggttccttggctgaactac
ccaattgacgattctttggagaatgattattcagaaattttccccgagaatttccctgaa
ttatcaggagtcgatcttaattcattatcagcacagaataatgcagtacctattgataga
agtggtagttatggtccagaagttagagatacgcatgcagtttcaacacatggctctgtt
aatcaagaacataagaatgcatctagagttggtgggggaggttcagatcctactagaaat
agaagcagtcaggtattttcgtcacagcaatgcccaatttcggctcagaatattcgacca
agagtttcggatttttctacgaataataacattaatccccaccaagctccttgcttgaat
tcgattcagaagccagtttcagcagctgggatatccaatctaaagatgcacaagaaagat
ctgccttctacacggccacctcaacctagtaacaatgtgggcttgatgaacttctcccat
ttctcaagacctgcggctcttgtcagagccaatctgcagagtattggtgctgcggtcact
ggttccccgggtgtagataggttgagaagtagtgacaaagtgtctgtcaccggcagcaac
cccattgagccatcggtggttgagtccacgagtggttcgagaagtgtcgctggaattcta
caccaactggtttcagtgcctgccaagatggatttaaacccacctgagaagtgttccaaa
gtcccagtctctttcgagcagtcagaagcagtttgtccggaagacgcctcgaaaaacaat
agatcacccgaccgtatgctttgtcagagctcaagttttgcagcaagcgtcgccttagga
agaaccgagagtgaaaaggcctttgagcctgtggtggcatcttcatctgtgtgttcaggc
aacagtgccgggggagcgtcgaatgatcccaagcatggaatgaagaggaaatctagggaa
attgaagactcagagtaccaaagcgaagacgttgaagatgaatctgtggatgtaaggaaa
ccgggtaagaatgccaagcgaagccgagctgcggaagttcacaatctgtcagaaagaagg
cgaagggataggatcaatgagaaaatgcgtgcattgcaagagcttatacccaactgtaat
aaggtggacaaggcttcaatgctggacgaggccattgaatatctgaaaacccttcagctt
caagtgcagattatgtcaatgggaagcgggctgtgtatgcctccaatgatgttacctgca
ggaatacaacacatgcgcccaccacccatgccacatttcccacccatgggtgtaggaatg
ggaatgggcatgggttttgggatgggaatgctcgacatgagctgttcctctggtcgccct
atgattcctgtccaccccatgcatgcactacagttcccgtgctcatctattccgggaccc
ccaaatttgcatgggatgcccggagctggccttcagatgttcggaatcccgggacaggga
cttcatttgtctttgcctcacccaccgtttattcctctgtctgggtttccaacaaaggag
gcttcggtacctcctgtgtcggggtctgctattcctgtgtcagttccagattctgctcca
cctccaagtacaatggaccatacacgagacaaaagctcgcaaatgatgcataaagcaagc
gatggttgcccacagactcagacgtcaactcaggcaacaaaagaatgctttgaacagtct
gacatggtgcaacagaatagtcaaacacctgccaatcttgatggcgacgaagccatcaac
aacaccatttgtggaagtgggcctccatccatcaggacatccacgtaa
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