Magnolia sinica: 131237414
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Entry
131237414 CDS
T09699
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131237414
Spliceosome [BR:
msin03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
131237414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
Cnd1
Adaptin_N
HEAT_EZ
MMS19_N
Cnd3
Motif
Other DBs
NCBI-GeneID:
131237414
NCBI-ProteinID:
XP_058091138
LinkDB
All DBs
Position
2:113562010..113602205
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AA seq
964 aa
AA seq
DB search
MPANQAMDAAPHILDIPLPTDRRSHLHLLSSLRSVVFHTSFPSEATIRSAIHALSLHLNR
CDEHDPIHLHQTLNLLTHISLLHPNLSPLVIDTVHSYLRHRWPTGRSDRLMLDALAAIIT
VSGHGRSRSSLSTMEGSVIISLLSSPIAAVRLRVLNLMAQILNVDSDTNYARAFLGFLKD
PYPLVRRAALDGLVGFAKLNGAGMCSLMTEGMYDRTVKLLLDLDEIVRLGAIRLVSEWGQ
ILADANCEVDNKEQLDEIFLQLCSMVRDMSMKVRVEAFLALGKTRLVSEDVLLQSLSKKI
LGNQKERKSAGKPIGKESALSTSSAAGAFVHGLEDEFHEVRRAASASLGSLVIFSIQFAD
DALNLLMDILNDDTSVVRLQTLKTMFHMASYDHLKVQEKHMHMFLNVLVDSDSPIRHAAR
ELLRVMKLPNLEMFRSSINGLLTNLETYPEDEAGIFFVLFCIGKSHWDFVVNFVKEFSPE
MIEPSSKGELGLDRPRVAALLVLIIAAPFSNEQLVYGIPTRLFSYAVPFLGRISSSLEDV
INRDSLLAYLFSCSKSNAAPNSEEGENFLHGVERCYLNHNSKKKTSQIDGSLQQVSDGAS
EVHFQDSLSDLRQVSGPPEAFQQKAAILYEATHVVKLILKTVADAWPLIKLGFTEEVLRI
LRGCKEELSMITVHSHRSVGVLAFASQYVKAIKFLTKAWEHLQPRKCWVMGKGVLDLLLD
KLDTSLTSMRYAFSGCSKEEEFHILNLILLSCVLRSSKVGICCGLTLKRLQAMVSRIQVL
CEPWPTELPDFVKELIKCCEVKINDVSYPLPVHKLVEIFSLEQIVFSGRFKHIKAELHVP
GNDSENPIPYISGLPVGITFQITLYNISSKDRLWLRMALGNSVQYIFLDFCQFEGGEEVR
KCTVEVPFYKTPKAASFTLRACCGMECPFEDVIPLMKGQGGPKCRLTFLSKEKDIYLVII
DKNS
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaaccaagccatggacgcggcaccacatattctagacatccctctccctact
gaccgtcgatctcacctccatctcctctcatccctccgttccgttgtcttccacacttcg
tttccttccgaagccaccattcgcagcgccatccacgccctctccctccatttaaaccgc
tgcgacgaacacgaccccatccatctccaccaaaccctcaatctcctcacacacatctcc
ctccttcaccctaacctctctcccctcgtaatcgacaccgtccattcctatctccgccat
cgatggcccacaggccgatccgaccgtctcatgctggacgccctcgcggcgatcataaca
gtatcaggccacggccgcagcagaagctcactgtccacgatggaagggagcgtcatcatc
tcgctgctgtccagtccgatcgcagccgtccgtttacgggttcttaatctgatggcgcag
atactgaatgtggattcggatacgaattacgcgcgcgcgtttttggggtttctgaaggat
ccatatccgcttgtgaggagagctgctttggatggattggttggttttgccaagttgaac
ggtgctgggatgtgcagtttgatgacggagggaatgtatgatcgtacagtcaagcttcta
ctggacctagatgagatcgtgagactgggcgcgattcgattggtcagcgagtgggggcaa
attttagctgatgcaaattgtgaagtggataacaaagagcaattagatgaaatatttctt
cagctttgctcaatggtaagagacatgagtatgaaggttagagttgaagcttttcttgcc
cttgggaaaaccaggctggtatctgaggatgtactgttgcagtccctatcgaagaaaata
ttaggcaatcaaaaagaaagaaaaagtgcaggtaaacccattggaaaagaatctgcactt
tccacatcaagtgctgctggtgcttttgtacatgggctcgaggatgaattccatgaggta
cggagagctgcctctgcttccttgggatcacttgtaatattctctatccagtttgccgat
gatgccttaaacttattgatggacatattaaatgatgatacctcggttgttcggttgcaa
actttgaaaacaatgttccatatggcatcatacgatcatctgaaagtgcaagagaaacat
atgcacatgttcctcaatgtgctagtggactcagattccccaatcagacatgcagcaaga
gaactacttcgagttatgaagttgcctaatcttgagatgtttagatcatcaattaatggt
cttctaaccaatttggaaacatatccagaggatgaagccggcatcttctttgttttattt
tgtattggtaaaagtcattgggactttgttgtcaactttgtgaaggagttttctccagag
atgatagagccttcttctaaaggagagttggggcttgatagacctcgggtagcagcacta
ttggtattaatcatagcagcacctttttctaatgaacagctcgtctatggtattccaaca
cggctattttcttatgcagtccccttcttgggaaggatctcttcctcgctggaagatgtt
ataaacagagattccctcttggcttatttgtttagttgcagtaaatccaatgcagcacca
aattctgaagagggtgaaaacttcttgcatggggttgaaagatgttacctaaatcataat
agtaaaaagaaaacaagccaaatagatggctccttgcagcaagtcagtgatggtgcctct
gaagtccattttcaggacagtttgtctgacctgaggcaggtctcaggcccccctgaagca
ttccaacagaaagcagcaatcctttatgaggccacacatgtcgtaaagcttattctgaaa
acggtggcagatgcctggcctctgataaaattgggttttacagaagaagtactaaggata
ttgaggggctgcaaagaagagctgtcgatgattactgtgcattcacacagatctgtcggt
gtattagcctttgcctcccagtatgttaaggcaatcaaatttctaacgaaagcatgggag
catttacagccgagaaagtgctgggttatgggaaagggggtcttagatctgctcctggac
aagttagacaccagtcttaccagtatgaggtatgccttttcagggtgcagtaaagaagag
gaattccatatcttaaatctgatattgcttagttgtgtactaaggtcatcgaaggttgga
atttgctgtggcctcacattgaagagattacaggctatggtttctcgtatacaagttctt
tgtgaaccctggcccactgaacttcctgatttcgttaaggagttaataaaatgttgtgag
gtgaaaatcaatgatgtctcgtacccacttcctgttcataagttagttgaaatcttctcc
cttgagcaaattgttttcagtggaagattcaaacacatcaaagcagaacttcacgtcccc
ggtaatgattctgaaaatccaattccatacatctcaggattgcctgtgggcattacattt
cagatcacgttgtataacatttcaagcaaggacaggctgtggctacgaatggctttggga
aattcggttcagtatatttttctggatttttgccaatttgaaggtggcgaggaagtgagg
aaatgcacagttgaggtacccttctacaaaactccaaaagcagcttcgttcacactgcgg
gcatgttgtggtatggaatgtccatttgaagatgtcattcctctgatgaaaggtcagggt
gggccaaagtgcaggcttacgtttctttccaaggaaaaggatatttatctggtcattatt
gacaaaaacagttaa
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