Magnolia sinica: 131245200
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Entry
131245200 CDS
T09699
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131245200
03400 DNA repair and recombination proteins [BR:
msin03400
]
131245200
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131245200
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
131245200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
Motif
Other DBs
NCBI-GeneID:
131245200
NCBI-ProteinID:
XP_058100474
LinkDB
All DBs
Position
5:complement(4559539..4698572)
Genome browser
AA seq
1626 aa
AA seq
DB search
MELVERTETSYSRPRKRSIVESSDEHGEEVFKFRILLPNGAITDLTLHGPGEEMFVDEFV
DVVRIEFERSAKRTPGIKRKIVWDGDVYLEDLSENKIRKRIHFNRFKSNKLHTLRLFDGA
EDTVDTFQNMWDLTPDTDLLSELPAEYTFETALADLIDNSLQAVWSNTLGDRRLVSVAVT
DQGISIFDSGPGMDGSDEKSIVKWGKMGSSNHRSSKGLAIGGKPPYLMPLFGMFGYGGPI
ASMHLGRCALVSSKTKESKKVYTLYLEREALLNNSRSECIWRVELFRLLIVSGRMLPYSN
TDGGIRDPLEDEIQTSPHGSFTKVEIYEPKLRCLEEFQLQCRLKDIYFPYIQCDDLHITG
KTTTPIEFQVNDVNLAEIEGGEVAITNLLSCNGPEFVLQLHFYINLDTTSKTTSNQGSGS
YRQANARLKCVYFPIVEGKESIDRILEKLEAEGCRILENFDNFCRVSIRRLGRLLPDARW
GRLPFMEPRRKVDKGQVLKRCCYRVKCFVETDAGFCPTRSKTDLAHHDPFTTALKNFGNK
SLGKDSEAIVKVHKGGKPLSVLQLEKEYQDWIMQMHEQYDQEIDSGEDQPVIVVSPRNKK
ELGISSDVVRVHQAIRRKGASWKSGQKIKILKGAVGCHKNNIYATLEYILIEGFQGDVGG
EARLICRPLGCPDEKGCLLAVNGENASLDIRKSISFPISVIDSGKCQAIDTATWKYQLEK
RHEKAPSTIDILNIQQCRQLEIDGALPVGASVSAGLAPPNEIVAVVRPFNFVSSSSSKDL
DPKYIVKDDLEMSMEVKCIDGSKDNNECEPVCAERVKPSSRSGLSGLYIFPLGCKFPSLF
RKAGIYKFSFSICTGSSCKPLEMQVVVTPCSIPRKWGILCDKQGPFADGKPLTVRVGSSF
PHLSIACYDKYYNRMPFESTPEVKVKIMAGGSTLVCVKEMMVDLSINKMTLQVTDMLIES
SNLDLIRPQYKATLEICSGDELFPVSVPCQVNPGHPHHLKMTRSPKLENSLIPGHVIDKL
ILELFDAYDNHVAKGVEVRVEVEGFCFQGRDGWMHKVDDHGCVNLSGLLKVTGGYGTSVH
LSVSFGGKILLKEEFQIAKRELRMVSQVPSHCIAASQLENIVFEVFDSEGRVDEGIHDEP
THDQFHALTLTSESSQIDSTIRYTFRRGKCTVPSIPVPREEGDFQFVASHSHHPVLRTSV
KILVIRAPKLELATLTEPSTPIVHSQCSDGRMLLLQDTYVFDPKHAHALVASLFEDGKKL
DRGLAKVGVQIGSIENKLKLLNDRKTAIAREIYDLEVLMEPLSFSPFDHVMDAKDLVVKR
IEGKGDDVVAVFCNLLKTIQIREPEKQYVQDVIGVVALLGTVNSYRLSRIFAEYLGEDYM
LAVVCKSNEAVSALEKYVEKGEIDWSCSLHEAASASEKTINGRFRVICLEDIRPYSGDIT
GNDRQRKLALPVPLLPSGRTPHGFLGYAVNMINLNMNMHITTAAGYGLRETLFYLLFGEV
QVYETRADMQEANACIKSGAISLDGGIKRGNGILVVLGNCDPEIRFPVEPEVLRSSQHTL
DVVKKITDKKAEMEALSAEILKETNALAKARHKFGKRREQLCKFMEEKAPFIKEVMESRK
QLIAEN
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggagctggtagaaaggactgaaacatcatatagcaggcctcgcaaaaggtctattgta
gaatcctcagatgaacatggagaggaggtgttcaagttccgaattctattgcctaatggc
gccatcacagacttgactttacatggacctggggaggagatgtttgttgatgaatttgtt
gatgttgtgagaatagagtttgagagatctgcaaaaagaacacccggaattaagcggaag
atagtgtgggatggagacgtttatcttgaagatctatcagaaaataagatcagaaagaga
atccattttaaccgctttaaaagcaataagctgcacacactcagactgtttgatggagct
gaagataccgtcgatacttttcagaacatgtgggatttaacacccgataccgatttgtta
tcggagcttcctgctgaatatacatttgaaacggctcttgctgatttaatagataattca
ttgcaggcagtatggtctaatactctgggtgataggagattggtgagtgtggcagtaaca
gatcaagggatttcgatttttgattctggcccaggaatggatgggagtgatgagaagtct
attgtgaagtggggaaagatgggttcctcaaatcataggtcttctaaaggattagctata
ggtggaaaaccaccttatttaatgcctttattcggtatgtttggttacggaggacctatt
gcttcaatgcatttgggaaggtgtgctttagtttcttccaagacaaaggagtcaaagaaa
gtctatactctatatcttgagcgggaggctttactcaacaactctcgttccgaatgcatt
tggagggtagaactttttagattgctgattgtttctggaaggatgttgccatattctaat
acggatggtgggatacgggatcctctagaagatgaaattcagacatcacctcatggtagc
tttacaaaggttgaaatttatgagccaaaattaaggtgcttggaagaatttcaactacaa
tgtaggctgaaggacatctattttccatatattcagtgtgatgatctccacataacaggg
aagacaactacacctattgaatttcaggtgaatgatgttaatttagcggaaattgagggt
ggggaggttgcgattacaaacttgctttcttgcaatggtccagaatttgttttgcagctt
catttttatattaatcttgatactacatctaaaactacaagtaatcaaggttcgggatca
taccgtcaagccaatgcacgcttgaagtgtgtttattttcccattgttgagggaaaagaa
agtatcgatcggatcttggagaagctagaagctgaaggatgcagaattttagaaaatttt
gacaacttctgtcgtgtatctattcgtcgattgggccgcttacttcctgatgctcgatgg
ggaaggcttccttttatggaaccaagacgaaaggtggataaaggccaagtattgaagagg
tgttgctatagagttaaatgttttgtggaaactgatgctggtttctgtccaacacgctcg
aagactgatttagcacatcacgatccttttactacagccttgaagaactttggcaataaa
tctcttgggaaagactcagaggcaattgttaaagtacacaaaggcggtaagccattgagt
gttttgcaactggaaaaggaatatcaagattggatcatgcagatgcatgaacaatatgat
caggaaatagactctggtgaggatcaacctgttattgttgtcagcccacgcaacaaaaag
gagcttggtatttcttcagatgttgtaagagtgcatcaggccataaggaggaaaggggct
tcttggaaatcgggtcagaagattaaaattcttaaaggggcagttggatgccataagaat
aatatttatgcaacattagagtacatcttgattgaaggttttcaaggcgatgttggtgga
gaagcacgcctcatatgcaggccactcggttgcccagatgagaaaggctgcttacttgca
gtgaatggtgaaaatgccagtttagacattcgcaagtctatatctttccccattagtgtt
attgattctgggaagtgtcaggcgatagatactgctacctggaagtaccaacttgagaag
cggcatgaaaaggccccttccactattgacatattaaatatccagcagtgtcgccaatta
gagatcgatggggctctcccagtaggtgcctctgtttccgctggtcttgctcctccgaat
gaaattgttgctgttgttaggccttttaattttgttagttctagctcctccaaagatctt
gatccaaagtacattgtcaaggacgatcttgagatgtcaatggaagtaaaatgtattgat
ggaagtaaagataataatgagtgtgaacctgtttgtgctgaacgtgttaaaccttcatct
cgtagtgggttaagcggtttatatatttttcctttaggatgcaaattcccaagtctcttt
cgtaaagctggcatctataagttttctttctctatctgtacaggttcgagttgtaaacct
ttggagatgcaagttgttgtcacaccatgttctatacctaggaagtggggaattttatgt
gataaacagggtccattcgctgatggaaagccacttactgtaagggttggttcatctttt
ccgcatctgtctattgcatgctacgataagtattacaaccggatgccattcgagagtact
cctgaagtgaaagtcaaaataatggctggaggaagcacacttgtttgtgtcaaagaaatg
atggtggatctttccataaataaaatgactctgcaagttacagatatgctgattgaaagt
agtaacttagacctgattcggccacaatataaagcaaccttggagatttgctcaggggat
gagttattcccagtatctgttccttgtcaagtcaatcctggacatcctcatcatcttaag
atgacacggtccccaaaattagagaactctttgatccctggtcatgtgatcgacaagctt
atattagagctatttgatgcttatgacaatcatgttgcgaaaggggtagaagtacgcgta
gaggtggagggattttgttttcaagggcgtgatggttggatgcataaggtggatgatcat
ggatgtgttaaccttagtgggcttctaaaagtcactggcggctacggtaccagtgtgcat
ctttctgtttcatttggtgggaaaatattattgaaggaagagtttcaaattgctaaaaga
gagttgagaatggtgtctcaggtacctagccattgcattgctgcttcccagcttgaaaat
attgtctttgaagtttttgattccgagggcagagttgatgaagggatacatgatgaacca
acacatgatcaatttcatgcacttacattaacatcagaatcatcgcaaatcgacagcaca
attcggtatactttccgacgtgggaagtgcaccgtgccttcaattcctgttcctcgagaa
gaaggggacttccagtttgtggcttcccattctcatcacccagtgcttcgaactagtgtt
aagattttagttattcgggccccgaaattggagctggccaccctaactgagccaagcact
cccatagtccattctcaatgttccgatggaaggatgttgcttctccaagatacatatgtc
tttgatcctaagcatgcacatgccttggtggcatctctctttgaagatgggaagaaactt
gatagaggtcttgctaaagttggggtacagattggaagcattgaaaacaagctgaaactg
ctcaatgatcggaagacagcaattgcacgagaaatatatgatttggaagttttgatggag
cctctatccttcagtccatttgaccatgtgatggatgcaaaagacctagtagtgaaaagg
attgaaggcaaaggtgatgacgttgttgctgtattctgtaatttattaaagaccattcag
attcgagaaccagaaaaacagtatgtgcaagatgtaatcggcgttgtcgctcttcttgga
acagtaaacagctatagacttagtaggatatttgcagaatatttgggtgaagattatatg
cttgcggtagtctgcaagtccaatgaagctgtaagtgctttagaaaagtatgttgagaaa
ggagaaatagactggagctgttcacttcatgaagcagcatccgcctcggagaaaactata
aatggccggtttcgtgttatatgtctggaagacataaggccgtacagtggagacattaca
ggcaatgatcgccaaaggaaactggccttgccagttccactgttaccatctgggaggaca
ccacatggattcctaggttatgcagttaatatgatcaatctaaacatgaatatgcatatt
acgactgctgctggctatgggcttcgggaaaccttattctatcttctttttggtgaggtc
caagtttatgaaacaagggcagacatgcaagaggccaatgcttgtataaagtctggggcc
atctctttggacggtggaattaagagaggaaatggcatccttgttgtcctaggaaattgt
gatccagaaatcagatttccagttgagccagaagttctacggtcctctcagcacaccttg
gatgttgtaaagaagataactgacaagaaagctgagatggaagccctaagtgcagaaata
ttgaaagagacaaacgcccttgccaaagcccgccacaaatttggaaagcgaagagagcag
ctgtgcaaatttatggaagagaaggcacccttcataaaggaggttatggagtctagaaag
caacttatagctgaaaactag
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