KEGG   Magnolia sinica: 131255480
Entry
131255480         CDS       T09699                                 
Name
(RefSeq) putative DNA glycosylase At3g47830 isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
msin  Magnolia sinica
Pathway
msin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131255480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msin03400]
    131255480
Enzymes [BR:msin01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     131255480
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     131255480
 Prokaryotic type
     131255480
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 131255480
NCBI-ProteinID: XP_058112199
LinkDB
Position
9:complement(58941189..58974745)
AA seq 287 aa
MATKCKRKVEIPGASSKLGKPKTTAAAAAELYPNHPRPTPEECRSVRDHLLSLHGFPQEF
ARYRKNKVIHDSPDPSKPFFGEDGSDETITRKEGVLDGLVRTLLSQNTTDSNSTKAFASL
KSSFPTWEDVLAAETKCIQDAIKCGGLAATKASCIKNILSSLLEKRGKICLEYLRGMPVD
EIKAELCCFKGIGPKTVACVLMFYLQQDDFPVDTHVFRIGKAIGWVPQGADREKAYHHLN
KRIPNELKFDLNCLLITHGKLCQRCTKKGSNNQRRTPHHTCPLFNYG
NT seq 864 nt   +upstreamnt  +downstreamnt
atggctacaaaatgcaaaaggaaggtagagatcccgggcgcctcttccaaacttggaaaa
cccaaaaccaccgctgctgctgctgcagagctgtaccccaatcaccctcgcccgaccccc
gaagagtgccgttctgtcagggaccatctcctctctctccacggcttccctcaggaattc
gccagatatcgaaagaataaggttattcacgacagtccagatccatccaagccatttttc
ggagaagacggctctgatgagaccatcactcggaaagaaggcgtgttggatggtctggtg
agaactcttctgtctcagaatacaaccgattccaactcgacaaaggcgttcgcttccctc
aaatcctcattcccaacatgggaagatgttcttgcagcggaaactaaatgtatacaagat
gctataaaatgtggcggcttagctgcgacaaaagcttcatgcatcaagaatattttgagc
tctctgcttgagaagagagggaaaatatgcttggagtatttgagaggcatgccagtagat
gaaattaaggctgagctctgttgcttcaaaggaattgggccgaaaacggtggcttgtgtt
ttgatgttctatcttcaacaagatgatttccctgtggacactcatgtatttcggattggg
aaggctattggttgggttccacaaggagcagacagggagaaagcgtatcatcatctcaac
aaacggatcccaaatgaattaaagtttgacttaaattgtcttcttattacacatgggaag
ctctgtcaaaggtgcaccaagaaaggttctaataatcaaagaagaacccctcatcacact
tgtcctctatttaattacggttga

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