Mycolicibacterium smegmatis MC2 155: MSMEG_2347
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Entry
MSMEG_2347 CDS
T00434
Name
(GenBank) phytoene dehydrogenase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm00906
Carotenoid biosynthesis
msm01100
Metabolic pathways
msm01110
Biosynthesis of secondary metabolites
Module
msm_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
MSMEG_2347
Enzymes [BR:
msm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
MSMEG_2347
1.3.99.28 phytoene desaturase (neurosporene-forming)
MSMEG_2347
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
MSMEG_2347
1.3.99.31 phytoene desaturase (lycopene-forming)
MSMEG_2347
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Gene cluster
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Motif
Pfam:
Amino_oxidase
DAO
NAD_binding_8
Pyr_redox_2
Pyr_redox
HI0933_like
FAD_oxidored
FAD_binding_2
NAD_binding_9
FAD_binding_3
Thi4
GIDA
Pyr_redox_3
MurD-like_N
Lycopene_cycl
AlaDh_PNT_C
MCRA
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ABK74949
UniProt:
A0QUV3
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Position
complement(2426974..2428527)
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AA seq
517 aa
AA seq
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MSRAIPGPTDHVVVVGAGLSGLSAALHLAGRGRRVTVVEREPWPGGRAGRIDTGGYRIDT
GPTVLTMPDILDDVFAAVGESVGDRLQLLPVDPAYRAQFADGSALEVHSDADRMAAAIAD
LAGPSEAAGYRRLRDWLTRLYRIEIDGFIGANFDSPLSLLTPQLAQLAAIGGFGKWDHMV
RRHLRDPRLQRVFTFQSLYAGVSPQRALAAYAVIAYMDTISGVFFPKGGVRAVPDALAAA
GADAGVRFHYGATVNCLERSADRVTAVHTDTGERIPCDAVVLTTELPRTYELLGRTPRRP
RPWRASPSAVVVHVGCRRIDRPVAHHNILFGDAWHDTFTDIIDDGRLMRDPSLLVTRPTR
GDPALAPAGRDLLYLLAPTPNLSSTAIDWETEGPAYAQRVVDTVAERLLPELRDDAQVLQ
VVTPADWARQGMVAGTPFALAHTFSQTGPFRPGNTVRGVANAVLAGSSTVPGVGVPTALL
SGRLAADRVTGTVRRTRTHHDINSVTAATADRKARMP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgatcccgggaccgaccgaccacgtcgtggtggtgggcgccggtctgtcg
ggcctgtccgcggcgcttcacctcgccggacgcggccgccgcgtcaccgtcgtcgagcgc
gaaccctggccgggcgggcgggcaggccgcatcgataccggcggttaccggatcgacacc
gggccaaccgtgctgacgatgccggacatcctcgacgacgtgtttgccgcggtcggcgag
tcggtgggcgaccgcctgcagttgctcccggtcgacccggcataccgcgcacagttcgcc
gacggcagtgcgctggaggtccacagcgacgccgaccgcatggccgcggcgatcgcggat
ctcgcggggccgagcgaggccgcgggctaccggaggctgcgcgattggctgacccggctg
taccgcatcgagatcgacggcttcatcggcgccaacttcgactcaccgctttcgctgctg
acgccccagctcgcgcaactcgcggcgatcggcgggttcggcaagtgggaccacatggtc
agacgccacctacgcgacccccggctgcagcgcgtcttcacgttccagtcgctctacgcc
ggtgtctccccgcaacgcgccctggcggcctacgcggtgatcgcctacatggacaccatc
tccggggtcttcttcccgaagggtggcgtgcgcgcggttcccgacgcgctggccgccgcg
ggcgccgacgccggggtgcgattccactacggcgccaccgtcaactgcctcgaacgctcg
gcagaccgcgtcaccgcggtgcacaccgacaccggcgaacgcatcccgtgcgacgcggtg
gtgctgaccaccgaactaccccgcacctacgaactgctgggccgcacgccccggcgccct
cggccctggcgcgcctcaccgtcggctgtcgtcgtccatgtcggctgccgccggatcgac
cggcccgtcgcacaccacaacatcctgttcggcgacgcgtggcacgacaccttcaccgac
atcatcgacgacggccgcctgatgcgcgatccgtcgctgctggtcacccgccccaccagg
ggcgatcccgcgctcgccccggcgggccgcgatctgctctacctgctcgcgcccacgccc
aacctgtcgtccaccgcgatcgactgggaaaccgaaggccccgcgtacgcccagagggtc
gtcgacaccgtggccgagcggctgctgccggagttgcgcgacgacgcccaggtgctgcag
gtcgtcacgcccgccgactgggcgcgccagggcatggtggcgggcacacccttcgcgttg
gcgcacacgttcagccagaccggaccgttccgcccgggcaacacggtgcgcggcgtcgcc
aacgccgtgctggccggatcctcgacggttcccggcgtcggcgtgccgaccgcactgctg
tccggccgcctggccgccgaccgggtcaccggcaccgtgcggcgcacccgcacccaccac
gacatcaactccgtcaccgcagccaccgccgaccggaaagcccgaatgccatga
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