Mycolicibacterium smegmatis INHR1: LI99_20985
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Entry
LI99_20985 CDS
T03409
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Pathway
msn00300
Lysine biosynthesis
msn00550
Peptidoglycan biosynthesis
msn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LI99_20985
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LI99_20985
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msn01011
]
LI99_20985
Enzymes [BR:
msn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LI99_20985
Peptidoglycan biosynthesis and degradation proteins [BR:
msn01011
]
Precursor biosynthesis
Amino acid ligase
LI99_20985
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Phage-MuB_C
FUSC-like
Motif
Other DBs
NCBI-ProteinID:
AIU15950
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Position
complement(4314565..4316127)
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AA seq
520 aa
AA seq
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MAMKLRPSRPVGHHLAPLAAAVGAVASENPAGSSSDLAAVHVTGVTLRGQDAQPGDLFAA
LPGASAHGARFAADAVAAGAVAVLTDPSGADLLAGTLDVPVLVHPAPRSVLGEAAAIVYG
RPAERLRVVGVTGTSGKTTTTYLAEAGLRAAGRVAGLIGTVGVRIDGTDLPSALTTPEAP
ALQALLALMVERGVDTVVMEVSSHALAQGRVDGIGFAVGGFTNLSRDHLDFHPTMADYFE
AKARLFDPQSPNHAAAAVICVDDQYGVQMAARAETPLTVSTSGAAADWRVEKITTAGPGA
QEFVLVDPGGMHHQLGVGLPGRYNVANAALAVALLDAVGVSPEQAAPGLRTATVPGRLES
IDLGQDFLALVDYAHKPGALQAVLETLRAAEPRRIAVVFGAGGDRDPGKREPMGRVTAEL
ADLVVVTDDNPRSEDPATIRSAILAGARAVASDAEIVEIGDRRAAIDHAVAWAQPGDIVL
IAGKGHESGQTVGDHTRPFDDRDELAAALEASGKTRDRSS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaagctgcgtcccagccgtcccgtcggccatcacctcgcaccactggctgcc
gcggtcggagcggtcgcctccgagaaccctgcaggctcgtcgtccgacctcgccgcggtg
cacgtcaccggcgtgacgctgcgcggtcaggacgcgcagccgggtgatctgttcgcggcg
ctgccgggcgcgagtgcacacggcgcgcgtttcgcggccgacgcggtcgccgcgggcgcg
gtcgccgtgctcaccgacccgtcgggcgcagacctcctcgcgggcaccctggacgtcccc
gtgctggtgcatcccgcgccgcgctcggtgctcggcgaggccgccgcgatcgtctacggc
cgtcccgccgaacgactgcgcgtggtcggcgtcacgggaacgtccggcaagaccaccacc
acctacctggccgaggccggcctgcgggccgcgggacgcgtcgcggggctcatcggcacc
gtcggcgtgcgcatcgacggcaccgatctgcccagcgcgctgaccaccccggaggcgccc
gcacttcaggcgctgctggcgctcatggtcgagcgcggtgtcgacaccgtcgtcatggag
gtgtcgagccacgcgctggcgcagggccgcgtcgacggcatcggcttcgcggtcgggggc
ttcaccaacctctcgcgtgaccatctcgacttccatccgacgatggcggactacttcgag
gccaaggcccggctgttcgacccgcagtcgcccaaccatgctgcggccgcggtgatctgc
gtcgacgaccagtacggcgtgcagatggccgcgcgcgccgagacacccctgaccgtgagc
acctcgggcgccgccgccgattggcgcgtcgagaagatcaccacggcgggcccgggcgca
caggagttcgtcctcgtcgaccccggcggcatgcaccaccaactgggcgtcgggttgccc
ggccgctacaacgtcgccaacgccgcgctggccgtcgcactgctcgacgcggtcggggtg
tcgcccgagcaggccgccccgggtctgcggaccgcgacggtgccaggacggctggaatcg
atcgacctcggccaggatttcctggccctcgtcgactacgcgcacaaacccggcgcgctg
caggctgtgctcgagacgctgcgcgcggccgaaccgcgtcgcatcgcggtggtcttcggc
gcgggcggcgaccgcgatcccggcaagcgcgaaccgatgggccgcgtcaccgcggaactg
gccgacctggtggtggtcaccgacgacaacccgcgcagcgaggaccccgccacgatccgg
tcggcgatcctcgcgggcgcccgcgcggtcgcgtcggacgccgagatcgtcgagatcggt
gaccggcgcgcggccatcgaccacgcggtggcgtgggcgcagccgggtgacatcgtgctg
atcgcgggtaaaggccatgagagcgggcagaccgtcggggaccacacgcggccgttcgac
gaccgggacgaactggccgccgcactggaagcctcggggaaaacaagggaccgaagttca
tga
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