KEGG   Malus sylvestris (European crab apple): 126593063
Entry
126593063         CDS       T09027                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    126593063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126593063
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     126593063
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 126593063
NCBI-ProteinID: XP_050114884
LinkDB
Position
12:30396554..30406828
AA seq 975 aa
MGVPAFYRWLADRYPQSIADVVEEHPREDSNGVPLPVNVSRPNPNGYEFDNLYLDMNNII
HPCFHPDGKPPPATYNDVFKSVFDYIDHLFTLVRPRKLLFLAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLKKEFEMGGAYLVPKEKPETSDSNVITPGTQFMAVLSVALQYYIQ
SRLNHNPGWQSTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
ALATHEVHFSILREVITFPGQQEKCFLCGQVGHLAAECRGVPDDNGNVVDETPIHQKKYQ
FLNVWVLREYLQYELDIPNPPFPLNFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINL
LMHIYRKEFTAMGGYLTDAGEVLLDRVEHFIQSVAVFEQQIFQKRVRIQQAIENNEERHR
ARRETSAELPAPVIDKVKLGEPGYTERYYAEKFQVSKPEEIDKVKKDLVLKYVEGLCWVC
RYYYQGVCSWQWYYPYHYAPFASDLKDLDELEITFFLGEPFKPFDQLMGTLPAASSSALP
EKYRNLMSDPRSPIHDFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLTETRKLESTLTE
EEQARNSIMLDLLYVCTSHPLAAHIIPYYQLCYQTPPHERCLWIIDTIASGGMNGFLWLS
ERNGVRHVIPSPVHGYPNLHYNQVLNVTYFYPTAHTHIPEPPEGVIMPRKVVRPTDIKPF
PTLWHDEGPRRQGRERPQIPGAIAGSMLGEAAHRLVKNTLNIRPSSSSSGFWDQPTLRNS
GNYAGNYPVNRPRSAGPSGYESGFREEFKYGNSFNPQVMMIRPRFLASNGMQGGRQNFRA
QERVQYQEQSFRTQEGVQYQEQYHNLRTAMSSLTVQGSVRTRSPAAAPPGMPNSGYQANH
QHQFVQNMGALPSPPTKWISKEPTGNGGLFVRQQETGYGGAYEQPQVKVYQVKTRAPQDM
SDRGDQSGSDSSGFV
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgggcgtccctgcgttttaccgctggctagcggatcggtacccgcagtccatcgcggac
gtcgtggaggagcatcctagagaggactccaatggcgtcccattgccagtcaacgtctcc
agaccaaatcctaacggatatgagttcgacaacttgtaccttgacatgaacaacattata
catccatgctttcatccggacggcaagcctccccccgcaacctataatgatgtattcaaa
tcagtatttgattacattgatcatctgttcacattggttcgcccaagaaagcttcttttt
ttggcaattgatggggttgctccaagagctaaaatgaatcagcaacgttctcgacgtttc
cgagctgcaaaagatgcggctgaagcagaagctgaagaggaaagactgaagaaagaattt
gagatgggaggggcatatttggttcctaaagagaaacctgaaacttcagactcaaatgtt
ataaccccaggcactcaatttatggcagtgctctcggtggcacttcaatattacatacaa
agcaggttgaaccacaaccctggttggcagtctacgaaggttatactttctgattcgaat
gttcctggcgagggagagcacaaaataatgtcatacatccggttgcaacgcaacctccct
ggttttgaccctaacactcgacattgtctttatggtttggatgcagatctgattatgctg
gctttagctacacacgaggttcacttctcaatattaagagaggtgattacttttccaggt
caacaagaaaaatgttttctttgtggacaagttggtcatctggcagctgagtgtcgtggt
gtacctgatgataatggaaatgtggttgatgaaacaccaattcaccagaaaaaatatcag
ttcctcaatgtatgggtattgcgtgaatatttgcaatatgagctggatattcccaaccct
ccttttccgctcaattttgaaaggatagtggatgattttgtttttatgtgtttttttgtt
ggcaatgactttcttccacatatgccaacattggagatcagagagggtgctattaattta
ttgatgcatatttatagaaaggagtttactgctatgggaggttatcttactgatgcgggt
gaggtattgttagacagagtggagcattttattcagtctgttgctgtttttgaacaacaa
atttttcaaaagcgggttcgaattcagcaggctattgagaataatgaagagagacataga
gctagaagagaaacttcagcagagctaccggctccggtgatagacaaggttaaattggga
gagcctggatacacagaaaggtattatgctgagaaatttcaagtatcaaaaccagaggag
attgataaagtcaaaaaggacttggttttaaaatatgtagaaggcttatgttgggtttgc
cgatattattaccaaggagtctgctcatggcaatggtattatccataccattatgctcct
tttgcttctgatctgaaagatttagatgaattggaaataacatttttcttgggagagcca
tttaagcccttcgatcagctcatgggaaccttaccagccgcaagctccagtgctcttccg
gaaaaatacagaaacttgatgagtgatccaagatctcctatccatgatttctaccctgct
gattttgaaattgacatgaatggcaagcgctttgcatggcagggcgttgccaaattgcca
ttcattgatgagaagaaattgcttacggagacaaggaagcttgaaagcactttaacggag
gaagagcaggctcggaatagcataatgcttgatttgctttatgtttgtacttctcatcct
ttggcagcacacatcattccgtactaccaactgtgttatcagacacccccacatgaaaga
tgtttatggatcatagacacaattgctagtggtggaatgaatggattcctttggttatct
gagagaaatggcgttagacatgtaatcccttcccctgttcatggttatccaaaccttcat
tataaccaagtcttaaatgttacctatttttaccccacagctcatacacacattccagaa
cctcccgagggtgtgataatgcccagaaaggttgtaagacctacggacatcaaaccattc
cctacgttatggcacgacgaaggtcctcgacgccaaggtagagagaggccacaaatacct
ggagcaattgctggatccatgttgggagaagcagctcatcgactagtcaagaacaccctt
aatattagacctagtagttcatcctccggattttgggatcaaccgacattacgaaattct
ggaaactatgcaggaaattatccagtcaaccgaccaagatcagctgggccctctgggtat
gagagtggcttccgcgaagaatttaagtacggaaattccttcaatcctcaggtcatgatg
attaggcctagatttctcgcatcaaatggtatgcaaggtggcagacagaattttagggca
caagaaagagtacaatatcaagaacagagttttaggacacaagagggagtacaatatcaa
gaacagtaccacaacctgagaaccgcgatgtctagtttaacagttcaaggcagtgtgaga
accaggtcaccagcagcggcgccacctgggatgccaaattcaggataccaagcaaaccat
cagcaccagtttgtgcagaacatgggtgcccttccttcgccacctaccaagtggattagc
aaagaaccaactggaaatggtggattatttgtaaggcaacaggaaactggatatggtgga
gcatatgagcaaccgcaggtcaaggtctatcaagttaagacgcgtgctccccaggatatg
tcagaccgtggagaccagagcgggagtgattcctcaggatttgtgtga

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