KEGG   Malus sylvestris (European crab apple): 126603260
Entry
126603260         CDS       T09027                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03008  Ribosome biogenesis in eukaryotes
msyl03013  Nucleocytoplasmic transport
msyl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    126603260
   03008 Ribosome biogenesis in eukaryotes
    126603260
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    126603260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126603260
   03009 Ribosome biogenesis [BR:msyl03009]
    126603260
   03016 Transfer RNA biogenesis [BR:msyl03016]
    126603260
   03036 Chromosome and associated proteins [BR:msyl03036]
    126603260
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126603260
   04031 GTP-binding proteins [BR:msyl04031]
    126603260
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     126603260
Ribosome biogenesis [BR:msyl03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    126603260
  Pre-60S particles
    126603260
Transfer RNA biogenesis [BR:msyl03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    126603260
Chromosome and associated proteins [BR:msyl03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     126603260
   Spindle formation proteins
    126603260
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126603260
GTP-binding proteins [BR:msyl04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    126603260
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_22 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 126603260
NCBI-ProteinID: XP_050126004
LinkDB
Position
15:8463462..8466191
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV
ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDEAFE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctttgccgaatcagcagaccgtggattacccgagcttcaagctcgtcatcgtcggc
gatggtggaacaggaaagacaacctttgtgaagagacatcttactggtgaatttgagaag
aaatatgaaccaactattggtgtggaggttcatccattggactttttcaccaactgtgga
aaaattcgattctactgctgggatacagccgggcaggagaagtttggaggtctcagagat
ggatactacatccatgggcaatgcgctataatcatgtttgatgttactgctcggttgaca
tacaagaatgtccctacatggcacagggatctttgcagggtctgtgaaaacatacccatt
gttctttgtggaaacaaggttgatgtgaagaacaggcaggtcaaggcaaagcaagttact
ttccacaggaagaagaatctgcagtactatgagatatcagctaagagcaattataacttc
gagaagcctttcttgtaccttgccagaaagcttgcaggggatcctaacttgcattttgtt
gaatcccctgccttggctcctccagaagtgcacattgatcttgctgcacagcaacagcac
gaggctgaacttgctgcagctgctagtcagccccttccggatgatgatgatgaagcattc
gagtag

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