Malus sylvestris (European crab apple): 126610336
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Entry
126610336 CDS
T09027
Name
(RefSeq) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126610336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126610336
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126610336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Big_2
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_16th
Ig_NUP210_3rd
Ig_NUP210_9th
Ig_NUP210_15th
Motif
Other DBs
NCBI-GeneID:
126610336
NCBI-ProteinID:
XP_050134341
LinkDB
All DBs
Position
17:complement(1606309..1618480)
Genome browser
AA seq
1971 aa
AA seq
DB search
MKMLRYTVLLGLFLLLVAGQTVSHLGSGPHIADVNILLPPRMTHPVEYRLQGSDGCFKWS
WDHHDILSVLPEYNTTSHCSTSALLRSIAPFSGRKETAVYAADVNTGVVIRCKVFIDKLS
RIQIFHNSVKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWQLETNEPPHHLAHVPLKDS
PLSDCGGLCGDLDFQISLEDNGVFSDLYVVKGIEIGHEIVSVHLLEPRFQHMTDRIALTV
AEAMSLDPPSPVFVLVGAAVQYSLKIIRGNKAQVVTLPSPHHRWSVSNSSVARVDSMMGL
ANAFSLGITNTIVEDTRVAGHIQVSSLNVVLPDSLSLYIVPLPTSGDLVEGIEAIPSMTR
WYGVSGRQYLIQMKVFSQGPDAQEIYLTESDDLKLSSDQSDYWRLSPVSNDIAIKHGWQN
SMILKATSQGQGKLAASLTYFSALNEKKEVLKVMQEVVVCDRVQFTLDKSGASPTILLPW
APSVYQEVELKATGGCAKASSDYKWFSSDMGIVSVSASGVVQAKKPGKATIKVLSIFDSF
NYDEVAIEVSVPASMVMLRNFPVETVVGTHLQAAVTMKASNGAYFYRCDAFSSFIKWKAG
SESFIIVNATVEAPALDILGNAEFYASSSGPACSRAYLYASASGRATLHATLSKEYHNLD
SSISGPVVLKASSLIAAYSPLSIRQAGDGNHFGGYFFDLAQTETDRQLVNLDKIYLVPGT
HLDVMLLGGPEKWNNGIDFVETMDILNEGHGHIDNGASVQRLSDSYKSLYRVSCQMLGTY
KIVFKRGNMVGDGHPLPAVAEVPLYLTCSVPTSIVLLADEHVNEREVIRTAIQADRSSGK
IRVTPVTVANGRTIRLAAVGISNSGEAFANSSSLSLRWELINCGEMASWDDADDLERSEH
SWERLLSLKNESGLCIVRATVIGFRDNMGAHKSVPLLEDSDNVLADAIRLQLVSTLIVSP
EFNLVYFNPNAKLNLSITGGSCFLEATVNNSRVLEVVQPPTGLQCSQLILSPKAMGTALV
TVYDIGLAPPLAASAVVQVVDIDWIKIVSPGEISLMEGNSQTIDLMAGISDGRTFDAYQF
AYMNIHVYVEDHIIEVLDINDISSPGGGFVNVPKFKILATHLGITTFFVSAVQQSGHEIL
SQPIMVEVYAPPVIYPQEIFLVPGASYVLTVKGGPTVGVYVEYMSLDDEIVAMHRSSGRL
SAMSPGNTTIRATFFRNGDIVICEAYGSVKVGVPSSVILNAQSELLGVGHEMPIYPLFSQ
GDLFSVYELCQNYRWTIEDEKVLSFYLEHFTGEKYGSQLEPSEKIQFPSHMSEEELGFIK
VISGRFAGRTNVAVSFSCEFISSGSKSWRRVYNASVSISVVPDLPLALGVPITWVLPPHY
TTTSILPSSSELHGQRDSQSHKGTIIYSLLKNLPEKNDGVQKDAISIDGDRIKTSESNNL
ACIQAKDRTTGRSEIAACVKVAEVSQIRITNKELPFHGINLAVGAEISLPVVYLDVLGNP
FYEAHGAVLFDMATNSPDVVSINNSSNTHVGSGNIHLKAMRHGRALVRISIHRMPQKSDY
ILVSVGAHIHPQNPVLRTGSHLNFSIEGLNDEISGRWRTANGSVISVSPLSGVAEVIGEG
TTQVYFEASSLKLRTTVIVPTEDIVSVDAPTETLTNVPFPTKGYNFYVKISSTDNEFKAL
GNTKELQYDCRVDPPFVGYAKPWLDLDTGSSYCRFFPYSPEHLVRLVPKSKDMKSDISVS
IKASLRKADHVSGSASALFVGGFSILEMGKDSMQLKLTPDSNKTTITILGNTDVEIYRHE
RDSLHITPIHKEGSGIGGRAKYEVKMLGSKRFKDTIFITLPANGQSVEIDVNGDPGDKTP
SETTFDRPLWLMVIAYIAIVLGCLVILGWMVACIICYWADELDRSRRSINAPATPSTAGP
ATPERTSSPAAASEQSPRTPQPFIDYVRRTIDETPYYRREPRRRVNPQNTF
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctgaggtacactgttttgctcggtttgtttcttctgctggtggcgggccaa
acggtgtcgcatttgggctccggtccgcacattgcagacgtcaacattctgctgcctccc
agaatgactcatccggtcgagtatcggctccaggggagcgatggttgcttcaaatggtca
tgggatcaccacgacattctgtctgttctaccagaatacaatacaactagtcactgctcg
acgagtgcgctgttgagatcaattgctccgtttagtggccggaaggaaactgctgtttat
gctgctgatgtaaatactggagttgtgattcgctgcaaagtttttattgacaagctttct
aggattcagatatttcataattctgttaaactcgacttggatgggcttgccacgcttcga
gttcgcgcctttgacagcgaagaaaatgtgttttcgtcactggtgggattgcaatttatg
tggcagctggaaaccaatgaaccgcctcaccaccttgctcatgttcctctaaaggactct
ccactgagtgactgtggtgggttgtgtggagacctagatttccaaataagccttgaagat
aatggtgtattttctgatctgtacgttgtaaagggaatcgaaattgggcatgagattgtt
tctgtacatttgcttgagccacgattccagcacatgactgatagaattgctcttactgta
gcagaagccatgtcacttgatcctccctcacctgtttttgtcctcgttggtgctgctgtt
cagtatagtctaaaaattatccgtgggaacaaagctcaagtggtaactttgccgtctcca
catcatcgatggtctgtttcaaactcttccgttgctcgtgtggactctatgatgggtttg
gctaatgcgtttagcttaggaattacaaacaccatagttgaagatacaagggttgctggc
cacatacaagtgtcgtcacttaatgttgtcctgccagattctttatctttatacattgta
cctttgcccacttctggtgatcttgttgagggaattgaagcaattccatccatgacacgt
tggtatggtgtttctggccgtcaatacctcattcaaatgaaggttttctcacagggtcca
gatgcacaagaaatctatcttacagagagtgatgatttaaagttgtccagtgaccagtct
gactactggagactttctcctgtatcaaacgatattgcaatcaaacatggctggcagaat
tctatgattctgaaggcaacttcacagggacagggtaaattggcagcttctttgacttac
tttagtgcattaaatgagaagaaggaggttctcaaggtcatgcaagaagtcgtggtttgt
gatcgagttcagtttactttggataaaagtggtgcatctccaaccattctccttccgtgg
gccccttctgtttatcaggaggtggagctaaaggctacaggaggttgtgctaaagcatcc
agtgactacaaatggttctcttcagacatgggtattgtgtctgtatctgcttctggtgtt
gtccaggctaagaagcctggtaaagctaccattaaagtgctatccatttttgattcattt
aattatgatgaggttgccattgaagtctctgttccagcatctatggtcatgctccgtaac
ttccctgttgagactgttgtaggaacacatcttcaagctgctgtaacaatgaaagcatca
aatggtgcctacttttatagatgtgatgcattcagttccttcataaagtggaaagcaggg
agcgagtctttcattattgtcaatgcaacagttgaggcacctgctttagacattttaggg
aatgctgagttctatgcatcaagttctggtcctgcatgttcacgggcatatttatatgcc
tcggcttctggtcgggcaacccttcatgctacattatcaaaagaatatcacaacttggat
agctctattagtgggcctgttgttttaaaagcatcttcacttattgcggcatattcaccg
cttagcattcgtcaggcaggtgatggaaaccattttggtggctacttttttgatttggct
caaacagaaactgataggcagttggtaaatttggacaaaatataccttgtccctggaacg
catctggatgttatgcttcttggtggacctgaaaagtggaacaatggtattgactttgtt
gaaactatggatatcttaaatgaagggcatggtcatattgacaatggggcttctgtgcaa
cggttatctgatagctataagagtctgtacagagtttcatgtcaaatgctgggaacctat
aaaattgttttcaaacgtggtaatatggttggggatggccatcctctacctgcagtagca
gaagttccgctgtatcttacatgtagcgttcctacctcaattgttctgctagctgatgaa
catgtaaatgaacgtgaagttatacggactgcaattcaggctgatcgcagttctgggaaa
atccgtgtcacccctgttactgtggcaaatgggcgcaccattagattagctgctgttggt
attagtaactctggagaagcgtttgcaaactcatcttctctttccttgaggtgggaactt
atcaattgtggcgagatggctagttgggatgatgctgatgatttagagaggtcggagcac
agttgggagaggttattgagcttgaaaaatgagtcaggcctgtgtatagttcgtgctact
gtcattggtttcagagataacatgggtgctcataagtctgttccactgcttgaggattca
gataatgttcttgcagatgcaattcgtctacagcttgtttctacactaattgtcagccca
gagttcaatctggtgtatttcaatcccaatgctaagttaaacctgtcaattactggtggg
agctgtttcttggaagctactgtgaacaattctcgagtactggaagtcgttcaaccccca
acaggtttacagtgctcacaactgatcctgtctcctaaagctatggggacggcacttgtg
acagtttacgatattggacttgctcctccccttgcagcttctgctgtggtacaagttgta
gacattgactggataaagattgtgtcaccaggcgaaataagccttatggaagggaactcg
cagactattgatttgatggctgggattagtgatgggcggactttcgatgcttatcagttt
gcctacatgaatattcatgtgtatgttgaggatcatattattgaggtgttagacattaat
gatatctcaagcccaggtggtggatttgttaatgtcccgaaatttaagattttggctaca
catcttgggatcaccactttctttgtgagtgctgtacaacaatctgggcacgaaattttg
agtcaaccaataatggtggaagtctatgcaccaccagtaatctacccacaagaaattttc
cttgtacctggagcatcttatgtgcttaccgtgaaaggaggaccaacagttggtgtatat
gttgaatatatgagtctggatgatgaaatagtggcaatgcatagatcttctggacggctg
tctgccatgtcacctggaaacaccactattcgtgccacattcttcagaaatggagatatt
gtgatttgtgaagcatatggcagtgttaaagtaggagttccttcttcggtgatactgaat
gcacaaagtgaactgcttggtgttggccatgagatgccaatatatcctttattttctcag
ggtgatttgttttctgtttatgagctttgccaaaactaccggtggactatagaagatgaa
aaggttttgagcttttatttagagcacttcactggtgagaagtatggttctcagttggaa
ccttcagaaaagattcaattccctagccatatgagtgaggaagagcttggttttatcaaa
gtcatatctggaagatttgcagggagaacaaacgttgcagtctcgttctcatgtgaattt
atatcttctggttccaaatcatggagaagagtttacaatgcatctgtatcaatatcggtg
gtgcctgatctccctcttgctcttggagtcccaataacctgggttcttcctcctcattat
actacaacaagtattttgccttcatcttcagaattgcatggccaaagggatagtcagagt
cataaaggaactattatctattccttattaaaaaatctccctgaaaagaatgacggtgtg
caaaaggatgctatttccatcgatggagacagaatcaagacatcagagagtaacaatctt
gcatgcattcaggcaaaagatcgtacgacgggtagaagtgagattgctgcttgcgtcaaa
gttgctgaggtgtctcaaataagaattacgaacaaggagttaccatttcatgggatcaat
cttgctgttggtgctgaaatttctcttccagtagtctaccttgatgtgctaggaaaccct
ttctatgaagcacacggtgccgttctctttgatatggcaaccaactctcctgatgttgtg
tccataaacaacagcagcaacacgcatgttggcagtggaaatatccatctcaaggcgatg
cgacatggtagagcgcttgtgcgaatatccatccatcgtatgcctcagaagtcggactat
atcctggtatcagtgggtgctcatatacatcctcaaaacccagttcttcgaacaggaagc
catcttaacttcagcattgagggcttaaatgatgaaatttctggccgttggagaactgca
aatggaagtgtcatatctgtatccccattgtctggggtggctgaagtaattggggaaggt
acaactcaagtatattttgaagcttcaagtttgaagctgcgaacaacagttatagtgcca
acagaggatattgtttccgtggatgctccaactgagacactaacaaatgttcctttccca
actaaaggatataacttctatgtgaagatcagcagtactgacaacgagtttaaggcgctt
ggaaacaccaaggaactccagtatgactgtagagttgacccgccttttgttgggtacgca
aaaccatggttagatcttgataccggtagctcatactgccgcttttttccttactcaccg
gagcatttggttcgtttggtacccaagtcaaaggatatgaaatcagatatatctgtttcc
atcaaagcttcactgagaaaagcagatcatgtttccggatctgcttctgctctttttgtt
ggagggttttccattttagagatgggcaaggattcaatgcagttgaagctgaccccagac
tctaacaagactaccataacaatcctgggaaacacagatgttgaaatctatcggcatgag
cgggattctttacacattactcccatccataaagaaggttctgggatcggtgggcgtgca
aaatatgaggtcaaaatgctaggatccaagagattcaaagatacaattttcattacactt
ccagccaatggacagagtgtggaaattgatgtcaacggcgaccctggagataaaacgcca
tctgaaactaccttcgatcgtccactttggctaatggtgattgcatatattgcaatcgtg
cttggatgtcttgttatattgggttggatggtggcttgcatcatatgttattgggcggac
gaactggatagatctcgaagatccattaacgctccagccactccaagcactgcaggccca
gccacacccgaacgtactagcagtccagctgctgcgagcgaacagtctcctcgaacacct
cagccgttcatagattacgttagaagaacaatagacgaaactccatattacaggcgagag
ccgcggaggagagttaatccacagaatacgttctag
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integrated database retrieval system
