Malus sylvestris (European crab apple): 126618427
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Entry
126618427 CDS
T09027
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126618427
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msyl01007
]
126618427
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126618427
Enzymes [BR:
msyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
126618427
Amino acid related enzymes [BR:
msyl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
126618427
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
126618427
Prokaryotic type
Other AARSs
126618427
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
126618427
NCBI-ProteinID:
XP_050142452
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Position
4:3833212..3846356
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AA seq
1184 aa
AA seq
DB search
MEEVCEGKDFSFPKQEETILKLWSEIKAFETQLERTEGQPEYVFYDGPPFATGLPHYGHI
LTGTIKDVITRFFSMTGHHVIRRFGWDCHGLPVENEIDRMLGIKRRDDVLKMGIDKYNEA
CRSIVTRYVGEWEKVISRTGRWIDFNNDYKTMDLKFMESVWWVFGQLFEKGLVYKGFKVM
PYSTGCKTPLSNFEAGQEYRDVPDPEIMVTFPIVGDPQKANFVAWTTTPWTLPSNLALCV
NANFTYVKVRNKYSGKVYVVAESRLSALPNEKPKENVAHGSVGDSKKLNSKAKGSSGGKK
ETVDSSYEVLEKFSGSSLEGKKYEPLFDYFTEFSDVAFRVVVDNYVTDDSGTGIVHCAPA
FGEDDYRVCLENQVINKGENLIVAVDDDGCFTERITDFSKCYVKDADKDIIEAVKAKGRL
VKSGTVTHSYPFCWRSKTPLIYRAVPSWFIRVELLKEKLLENNKQTYWVPDFVKEKRFHN
WLENARDWAVSRSRFWGTPLPVWISEDGEEIVVMDSIQKLEELSGVKVFDLHRHNIDHIT
IPSSRGPEYGVLRRIDDVFDCWFESGSMPYAYIHYPFENVEHFEENFPGHFVAEGLDQTR
GWFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMEVIDDYGADALRL
YLINSPVVRAEPLRFKKEGVFGVVKDVFLPWYNAYRFLVQNAKRLEVEGFSPFLPVDLAT
VQKSSNVLDQWINSATQSLVYFVQQEMNGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKG
RTGEEDCRMALSTLYNVLLVSCKVMAPLTPFFTEVLYQNMRKALKESEESIHFCSFPEGE
GKTDERIEQSVTRMMTTIDLARNIRERHNKPLKTPLREMVIVHPDADFLDDIGGKLREYV
LEELNVRSLVPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKAMSQESILAFEKAG
EVTLSGHCLKLGDIKVVRDFKRPNGTTEKEIDATGDGDVLVILDLRPDESLFEAGIAREI
VNRIQKLRKKAALEPTDMMEAYFESLDQDKSVSQRVLHSQEQYIRDTIGLPLLLSSVMPS
DAVVVAEESFHGISGMSFVISLTRPVPVLDSDAILSLYSGNTEFARALQTYLLSRDHANL
KSEFQQGKGKINVDCIENTPAVELVLGDHVFLTVGDFISRTKSQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgtgcgagggcaaggacttctccttccccaagcaagaggagactatcctc
aagctctggtccgaaatcaaggccttcgaaacccaattggagcgcacagagggccagccc
gagtacgtcttctatgacggtcctccattcgccaccggactcccacactacggccacata
ctgaccggcaccatcaaagacgtcatcacgcgattcttctccatgacgggccaccacgtc
attcgccgcttcggctgggactgccacggtctgccggtagagaacgagatcgatcggatg
ctcgggatcaagcgtcgggacgatgtgctgaagatggggattgataagtacaatgaagcc
tgcaggagcattgttactcggtacgtgggggagtgggagaaggttatttcgcggacgggg
cggtggattgatttcaataacgattacaagacgatggatttgaagttcatggagagcgtt
tggtgggtctttggccagttatttgagaagggtcttgtttataaaggcttcaaggtcatg
ccatacagcactggttgcaagacaccgctttccaattttgaggctggtcaagagtacagg
gatgtacctgatcctgaaattatggtgacttttccaattgttggagatccgcaaaaggca
aattttgtagcttggacaactacaccatggaccctcccgagcaatttggccctttgtgtc
aatgcaaattttacttatgtgaaggtccgcaacaagtactccggaaaagtttatgttgtt
gctgaatctcggttgtcagctcttcctaatgagaaaccaaaggaaaatgtagcacatgga
tctgttggtgattcaaaaaagctaaattcaaaggccaaaggatcctcaggtgggaaaaag
gaaaccgtggacagttcatatgaagtattggagaaattctctggttcttcgttagaggga
aagaagtatgaaccgctgtttgactactttacggagttctctgatgtggcatttagagtt
gttgtggacaactatgttaccgatgacagtggtactggtattgtgcattgtgctcctgca
tttggtgaagatgattatcgtgtttgccttgaaaatcaagtaatcaacaagggagagaac
ttgattgtagctgttgatgatgatggatgctttaccgaaagaattaccgacttcagcaag
tgctatgtcaaggatgcagataaagatattattgaagcagtgaaggcaaaaggaaggcta
gtgaagtctggaacggttactcattcttatcccttttgctggagatctaaaactccgctt
atttacagagctgttccaagctggtttatccgagtggagctgttgaaagaaaaattgtta
gaaaacaacaagcagacttactgggttcctgattttgtcaaggaaaagcgctttcacaat
tggctggagaatgcaagagattgggctgttagtcgaagtagattttggggcactccactt
ccagtctggattagtgaggatggtgaagaaattgttgtaatggattctattcagaagctt
gaagagctttctggtgttaaggttttcgatctgcaccgccacaatattgatcacattact
attccctcaagccgaggtcccgaatatggtgttcttcgacgtatagatgatgtgtttgat
tgttggtttgagagtgggtccatgccttatgcttatatccactatccttttgagaatgtt
gaacattttgaggaaaatttccctggccattttgtggctgaggggctagatcagactcgt
ggatggttctacactcttatggtgttatctacggcgttatttgggaaacctgcttttagg
aacctcatttgcaatggacttgtccttgctgaggatgggaaaaaaatgagtaaaagtttg
aaaaattatccttcaccaatggaagttatcgatgactatggggccgatgcactaagacta
tacctcattaactctcctgttgtgcgtgcggagccgttacgtttcaagaaggaaggagtt
tttggtgttgtcaaggatgtatttcttccttggtacaatgcatatcggttccttgttcag
aatgcaaagagacttgaagttgaagggttttcccctttcctccctgttgatctagccact
gtacagaagtcgtctaatgtgcttgaccagtggatcaattcagccacacagagtcttgtt
tattttgttcagcaagagatgaatggttatcgactttatacggtagttccatatcttttg
aagtttcttgacaacttaacaaatatttatgtgcggttcaatcggaagaggctaaagggt
cgaactggtgaagaggattgcagaatggcactttcaactctctacaatgtcctcttggtg
tcatgtaaagtaatggcaccattaacaccattcttcacggaggtcctttatcaaaatatg
cggaaagctttgaaagagtcagaggaaagcattcatttttgcagttttcctgaaggagaa
ggaaagacagacgagcgtatagagcaaagtgttacaagaatgatgacaacaattgatctt
gcccgtaatattcgtgagcgtcacaacaagcctctcaaaacacccctgagggagatggtt
attgttcatcctgatgcagactttcttgatgatattggtggaaagctaagagagtatgta
ttggaggaacttaatgtaagatctcttgtcccatgtaatgatacactgaagtatgcttcg
ttacgagcagagcctgattttagcgtattaggtaagcgacttggaaaatctatgggagtt
gttgccaaagaagtcaaggccatgtctcaagaaagcattttagcatttgagaaagctgga
gaagttactctttctggtcattgtttaaagctgggtgatattaaggttgttagggatttc
aaacgtcctaatggaacgacagaaaaggagattgatgctacaggggacggtgatgttttg
gtgattttggatttacgtccagatgagtcattgtttgaggccggtattgctcgtgagatt
gtaaacagaattcagaagttacggaagaaagctgcccttgaacctactgacatgatggag
gcatactttgaatcgttggatcaagataaatcagtctcacaacgggttttgcactctcag
gaacaatacattagggataccattggtttgccattgcttctgtctagtgtgatgccatca
gatgctgtcgttgttgcggaggagagtttccatgggatatctggcatgtcatttgttatc
agtttgacccgacctgtgccagtgcttgactcagatgcaattctttctctatattcagga
aacacagaatttgcacgggctctgcaaacgtacttgttatcaagggatcatgcaaatttg
aagtccgagtttcaacaaggaaagggaaagataaatgttgattgcattgagaacactcct
gctgtggaactggtgttgggggatcatgtattcttgaccgtcggggacttcatttctaga
acaaaatctcagtag
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integrated database retrieval system
