Malus sylvestris (European crab apple): 126619375
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Entry
126619375 CDS
T09027
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126619375
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
126619375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
Cnd1
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
126619375
NCBI-ProteinID:
XP_050143688
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Position
4:24549764..24554552
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AA seq
952 aa
AA seq
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MADHVILTCGHPLILPTISADEPLSPEVLPPLRSLIVNPSTPGPTITSILETLTRSLRLS
RDPLTIRFTLKLLSDLASRHPHLSFFVFDSVRSHLLSTGSPRVAADSLDALASIVESNRA
LAPGIEELDDRLFASLCFSPSCSVRPWLLRNAERFGVQPHLLFTLFLGFTKDPYPNVRKE
ALDGLVGLSENGVIEDRDMIEGCYFRAVELLNDMEDCVRLAAVRTVCSWGLMLVACISEM
KAYWSDEVFVKLCSMVRDMSMEVRVEAFYALGKIKLVSEDILLQTLSKRVLVTMKGKGSF
AQCSDEQLEVSGSSVAGAFVHGLEDEFHEVRKGACHALRTLAILSAKFAGEALNLLMDVL
NDDSILVRLQAFETMHQLATFDLLKVQEAHMHMFLGTLVDNDTLIRSSARKVLKLAKLPQ
LKMFRLTIDALLENMERYPQDEADALSVLFHIGRNHGKFVVRLIEEVSPQMEPMSNGKLD
FDSMRVAGLLVLAISAPVSDERDCNIPPAIFSYAVTYLGRISHALSDIINQNSLLDYLSQ
CSRSQGPYDVEFNKFNFKAGEPCLPLLENDGSTCTSNKMTGSAEMSEIVSPIMEPREVGT
SLVAYQLEVHDEVTKLVNVVLARAKDIWPVVQSGFVNEVMRTLRSCKEELATFTSDSLPS
AGVLPFTKQYVQIMKLLTRAWMNFLPSVLFPPYGMGELDLVLRKLDTRLRDLKSTFIRLS
KREELHILELILVTCVLRLSKVEICCHLRTLRKLSSTMSQVESLLRDGSLEPSRFITEVE
KLSLETGTFPNEGSCNPRLFQRALESFSLKQLVLSGGIKHVNAELDIPDNSYENPLRFVA
GLPVGIPCHITLHNVLAESRLWLKMTVNEDDDSTRFVFLDLNLFGGSEDIRIFTFSPPLY
RTPKAFSFTIKVCICVECLSEVEDVSSVKIRGPRHELTYLCREKDVYLSMIK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccacgtgatcctcacgtgcggtcaccctctcatcctcccgacaatttccgcc
gacgaacctctctctcccgaagtcctgcctcccctgagatccctcatcgtcaacccctca
actcccgggcccacaatcacctccatcctcgaaaccctaactcgctctctccgactcagt
cgcgatccgctcaccatccgattcactctcaagctcctctccgacctcgcctcgcgacac
ccccacctctcgttcttcgtattcgactcggtccgttcccacctcctctccaccggctcg
ccccgcgttgctgccgactcactcgacgcgctcgcttcaatcgtggagagcaaccgagcc
ctagctcccggaattgaagaattggatgaccggctgttcgcctcgctgtgtttcagtccg
tcttgctccgtacggccgtggctgctcagaaacgccgagaggttcggcgtacagcctcat
ttgctgttcactctgtttctagggtttacgaaggatccatatccgaatgtgagaaaagag
gcgttggacgggctcgttgggttgagtgagaacggtgtgatcgaggaccgtgacatgatc
gaaggctgctattttcgtgccgttgagctcctaaacgacatggaagattgcgttcgattg
gctgccgttcgcacggtgtgttcttggggtctaatgctcgtggcgtgcatttcggagatg
aaagcatattggtctgatgaagtatttgtcaaactttgttcaatggtgagagacatgagc
atggaggttagggttgaagctttttatgctcttgggaagataaagttggtatctgaggat
attcttttgcaaaccctgtcaaagagagttctggtaaccatgaaaggaaaaggatctttt
gctcagtgctctgatgaacaactagaagtatcaggttcaagtgttgctggagctttcgtg
cacggactagaggatgaatttcacgaggtgcgaaaaggtgcctgtcatgcattgagaaca
ctggccatactctctgccaagtttgctggagaagccttaaacttattgatggatgtactg
aatgatgactcaatacttgttcggttacaagcttttgaaactatgcatcaattggctacc
tttgaccttctgaaggtgcaagaagcacacatgcatatgtttcttggcactctggttgac
aatgataccctcataagatcttccgcaaggaaagtacttaaattggcaaagctgcctcag
ttaaagatgtttaggttaactattgatgcccttctagaaaatatggaaagatatccacag
gatgaagcagatgcattatctgttttgtttcatattggacgaaatcatggaaagtttgtg
gtccgcttgattgaggaagtttctccacagatggagccaatgtctaatggaaagttggac
tttgatagcatgagagtggccggcttgctagttctggccatctcagctccagtttcagat
gaacgtgattgcaatattccacctgcaatattttcttatgcagtaacgtatctgggaagg
atttctcatgcactgagtgatattatcaatcaaaatagccttttggattatttgtctcag
tgcagtagatcccaaggaccatatgatgtagagttcaacaagttcaactttaaagcgggg
gagccatgcttgcctttacttgaaaatgatggttcaacctgtactagtaacaagatgact
ggttcagctgaaatgtctgaaattgtgtctccaataatggagccaagggaagtaggaact
tcacttgtagcataccagctagaggtgcatgatgaagtgactaagttagtgaatgttgtt
cttgcaagggccaaggatatctggccagtagtacaatcaggattcgtgaatgaagtaatg
aggactttgagaagttgcaaggaagagctggcaacattcacttctgactcacttccatct
gcgggagttttgcccttcacgaagcaatatgttcagataatgaaactgcttacaagggca
tggatgaactttctgccttcagtgctttttcctccttatggaatgggagaattagacttg
gtattaagaaagctggacacaaggcttagagatctgaagagtacatttataagattgtct
aaaagggaggagttgcatatcttggagctgatacttgtgacctgtgtgctcagattgtcg
aaagtagaaatttgctgccatcttcgaaccttgagaaagctctctagtacgatgtcacag
gttgaatctctccttagagatggatctcttgaaccttccaggtttataactgaagttgag
aagttatcattggaaactggtacctttcccaatgaaggttcctgtaatccccgccttttt
caaagagcacttgaaagcttctccctcaagcagcttgtgttgagtggtggaatcaagcac
gtaaacgcagagctggatatacccgacaacagctacgaaaatcctctccggtttgtcgca
ggactgcccgttggcataccctgccatatcacactccataacgttttagccgaaagtcgg
ctgtggctgaagatgactgtaaatgaagacgacgattcaactcgatttgtgtttttggat
ttaaaccttttcggaggctccgaagacatccggatctttacgtttagtccacccctttac
agaaccccaaaagcattttctttcacaattaaggtgtgtatctgtgtggaatgtttgtcc
gaggttgaggatgtctcctctgtcaaaattcggggccctagacatgaactaacgtatctt
tgtcgagaaaaggatgtttatctttctatgatcaagtaa
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