Malus sylvestris (European crab apple): 126619891
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Entry
126619891 CDS
T09027
Name
(RefSeq) ataxin-3 homolog
KO
K11863
ataxin-3 [EC:3.4.22.-]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126619891
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126619891
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126619891
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C86
126619891
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
126619891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Josephin
UIM_2
LbR_Ice_bind
UIM
Motif
Other DBs
NCBI-GeneID:
126619891
NCBI-ProteinID:
XP_050144270
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Position
4:complement(22228607..22232064)
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AA seq
388 aa
AA seq
DB search
MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQMMLVEGGS
HAGDFLSEESHNVSLDGDFSIQVLQRALEVWDLQVIPLDSPVAEPAQIDPELENAFICHL
QDHWFCIRKVSGEWYNFDSLYAAPLHLSKFYLSAYLDTLKGSGWSIFLVRGNFPKECPIS
SSEASNGYGQWLSPEDAERINKSCNSTNAQPERTNLNPQSSAQFLSNEEADLLSEMEDED
LKAAIAASLMDSTPAITCAQAGSPHYSSRNPQDSNDNPQNSTQNPRDSTNNSQNSTQNPQ
DSNDNPQNSTQNPQDSTDNSQNITGNPQNITGNPQNITGNPQNITGTPQNITGNPQNITG
SPQISTGNPRISTGNPQIESSGSLEKID
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggcgagcaacggagggatgttgtaccacgaggtacaagagtcgaagctctgc
gccgtgcattgcgtgaacacggtgctgcagggtcctttcttctccgaatttgatttggcg
gcgctcgcctccgatctcgatcggaaggagcggcagatgatgctcgtcgagggcggctca
cacgccggcgatttcctctccgaggagtctcacaacgtctccttggacggcgatttcagt
attcaggttctacaaagggctttagaggtttgggatctgcaggtcatcccccttgattct
ccggttgctgagcccgcccagatagatcctgagcttgaaaatgcatttatctgtcatttg
caggatcattggttttgtatccggaaagtgagtggagagtggtataacttcgacagtctt
tatgcggctccattgcacctctcaaagttttacctttcagcctatctggacacactaaaa
ggctcgggttggagcattttcctggtgagaggcaacttcccaaaagagtgtcccatctca
tcctccgaagcttctaatggttatgggcagtggctttcacctgaagatgctgagaggata
aataaatcctgcaactccacaaatgctcagcctgaaagaacaaatttgaatccacaatct
tcagcacaatttctatcaaatgaggaagcagatttgctttcagaaatggaagatgaggat
ttgaaagctgctatagctgccagtcttatggattctaccccagccattacctgtgctcaa
gccggaagcccacattatagcagcagaaaccctcaggacagcaacgacaaccctcagaac
agcacccaaaacccacgagacagcaccaacaactctcagaacagcacccaaaaccctcag
gacagcaacgacaaccctcagaatagcacccaaaaccctcaagacagcaccgacaactct
cagaacattaccggaaaccctcagaacattaccggaaacccccagaacattactggaaac
ccccagaacattaccggaacccctcagaacattactggaaatcctcagaacattactggc
agccctcagatcagcactggcaatcctcggatcagcactggcaatcctcagatagaaagt
tcagggagccttgagaaaattgattga
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