KEGG   Malus sylvestris (European crab apple): 126620134
Entry
126620134         CDS       T09027                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    126620134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126620134
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     126620134
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 126620134
NCBI-ProteinID: XP_050144575
LinkDB
Position
4:28907290..28916765
AA seq 962 aa
MGVPAFYRWLADRYPQSIADVVEEHAREDSNGVPVPVDVSGPNPNGSEFDNLYLDMNGII
HPCFHPDGKPAPATYDDVFKSIFDYIDHLFTLVRPRKLLFLAIDGVAPRAKMNQQRSRRY
RASKDAAEAEAEEERLKKEFEMEGTSLPSKEKPETLDSNVITPGTQFMAVLSVALQYYIQ
SRLNHNPGWRSTKVILSDANVPGEGEHKIMSYIRLQRSLPGFDPNTRHCLYGLDADLIML
ALATHEVHFSILREVITFPGQQEKCFLCGQVGHLAAECRGISDDNGNVVDDTPIHQKKYQ
FLNIWVLREYLQYELDIPNPPFQLNFERIVDDFVFMCFFVGNDFLPHMPTLEIREGAINL
LMHIYRTEFTAMGGYLTDAGEVLLDRVEHFIQSVAVFESQIFQKRVRIQQAIENNEERHR
ARRETSAELPAPVMDKVKLGEPGYTERYYAEKFQVSTPEEIDKVKKDLVLKYVEGLCWVC
RYYYQGVCSWIWYYPYHYAPFASDLKDLNELEITFFLGEPFKPFDQLMGTLPAASSSALP
EKYRNLMTDPRSPIHNFYPADFEIDMNGKRFAWQGVAKLPFINERKLVTETRKLESTLTE
EEQARNSVMLDLLYVYPSHPLAAQISMYYQQFYQTPLHERFLWRIDPIASGGMNGFLGLS
ERNGLRYVIPSPIRGYPDLDCNQVLNITYLNPADHKHIPEPPKGVILPRKVVRPTDIKPF
PTLWHDEGPRRQGRERPQIPGAIAGPMLGEAAHRLVKNTLNIKPNGSSPGLWDQPPLRNS
GNYAGNYPVNRPRPAGPSGYERVFREEATYGNSFNPQVMMARPRIPASNGMQGDRQNFRA
QERVQHQEQNFRTQDRVQDQEQYNLRSVMSSLTVQDSGRTRSPAAAPPGMPNSGYQANRK
HQFVQNMGALPSPPTKWISKEPTGNGGLHVRKQETGYGGAYEQQQVKKVYQVKTRAPQDV
KP
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgggcgttcctgcgttttaccgctggctagcggatcggtacccacagtccatcgccgac
gtcgtggaggagcatgccagagaggactccaatggcgtccctgtgccagtcgacgtctcc
ggaccgaaccctaatgggtccgagttcgacaacttgtaccttgacatgaacggcattata
catccctgttttcatcccgatgggaagcctgcccccgctacctatgatgatgtattcaaa
tcaatatttgattacattgatcatctattcacattggttcgcccaagaaagcttcttttt
ttggcaattgatggggttgctccaagagccaaaatgaatcagcaacgttctcgacgttac
agagcttcaaaagatgcggctgaagcggaagctgaagaggaaagacttaagaaagaattt
gagatggaggggacatctttgccttctaaagagaaacctgaaactttagactcaaatgtc
ataaccccgggcactcaatttatggcagtgctctcggtggcacttcaatattacatacaa
agtaggttgaaccacaaccctggttggcggtctacgaaggttatactttctgatgcaaat
gttcctggcgagggagagcacaaaataatgtcatacatccgattgcaacgcagcctccct
ggttttgatcctaacactcgacattgtctttatggtttggatgcagatctaattatgctg
gctttagctacacatgaggttcacttctcaatattaagagaggtgattacttttccaggt
caacaagaaaaatgttttctttgtggacaagttggtcatttggcagctgagtgtcgtggt
atatctgatgataatggaaacgtggttgatgatacaccaattcaccagaagaaatatcag
ttcctcaacatatgggtattgcgtgaatatttgcaatatgagctggatattcccaaccct
ccttttcagctcaattttgaaaggatagtggatgattttgtttttatgtgcttttttgtt
ggcaatgactttcttccacatatgccaacattggagatcagagagggtgctattaattta
ttgatgcatatttatagaacggagttcactgctatgggaggttatcttactgatgcgggt
gaggtattgctagacagagtagagcattttattcagtctgttgctgtttttgaaagccaa
atctttcaaaagcgggttcgaattcagcaggctattgagaataatgaagagagacataga
gctagaagagaaacttcagcagagctaccggctccggtgatggacaaggttaaattggga
gagcctggatatacagaaaggtattatgctgagaaatttcaagtatcaacaccagaagag
attgataaagttaaaaaggacttggttttaaaatatgtagaaggcttatgttgggtttgc
cgatattattaccaaggagtctgctcatggatatggtattatccataccattatgctcct
tttgcttctgatctaaaagatttaaatgaactggaaataacatttttcttgggagagcca
tttaagcccttcgatcagctaatgggaaccctaccagctgcaagctctagtgctcttccg
gaaaaatacagaaacttaatgactgatccaagatcacctatccataatttctatcctgct
gattttgaaattgacatgaatggcaagcgctttgcatggcagggtgttgccaaattgccg
ttcattaacgagaggaaattggttactgagacaaggaagcttgaaagcactttaacggaa
gaagagcaggctcggaatagcgtgatgcttgatttgctttatgtttatccttctcatcct
ttggcagcacaaatcagtatgtactaccaacagttttatcagacacccctacatgaaaga
tttttatggcggatagacccaattgctagtggcggaatgaatggattccttgggttatct
gagagaaatggcttaagatatgtaatcccttcccctattcgtggttatcctgaccttgat
tgtaaccaagtcttaaatattacatatcttaatccggcagatcataaacacatcccagaa
cctcccaagggtgtgatcctgcccagaaaggttgtaagacctacggacatcaaaccattc
cctacgttatggcacgacgaaggtcctcgacgccaaggcagagagaggccacaaatacct
ggagcaattgctggacccatgttgggagaagcagctcaccgcctggtcaagaacaccctt
aatattaaacctaatggttcatcccctggattatgggatcaaccgccattacgaaattcc
ggaaattatgcaggaaattatccagtcaacagaccaaggccagctgggccctctgggtat
gaaagggtcttccgcgaagaagcaacgtatggaaattccttcaatcctcaggtcatgatg
gctaggcctagaattcctgcatcaaatggtatgcaaggtgacagacagaattttagggcg
caagaaagagtacaacatcaagaacagaattttaggacacaagatagagtacaagatcaa
gaacagtacaacctgagatccgtgatgtctagtttaacagtacaagacagtgggagaacc
aggtcacctgcagcggcgccacctgggatgccaaattcaggataccaagcaaaccgtaag
caccagtttgtgcagaacatgggtgctcttccttcgccacctaccaagtggattagcaaa
gaaccaactggaaatggtggattacatgtaaggaaacaggaaactggatatggtggagca
tatgagcaacagcaggtcaagaaggtctatcaagttaagacgcgggctccccaggatgtc
aaaccgtag

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