KEGG   Malus sylvestris (European crab apple): 126620854
Entry
126620854         CDS       T09027                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RKP-like isoform X1
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msyl04121]
    126620854
Enzymes [BR:msyl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126620854
Ubiquitin system [BR:msyl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126620854
  Multi subunit type E3
   KPC complex
    126620854
SSDB
Motif
Pfam: TPR_RNF123 RKP_N SPRY zf-C3HC4_3 Ufd2P_core zf-RING_2
Other DBs
NCBI-GeneID: 126620854
NCBI-ProteinID: XP_050145137
LinkDB
Position
1:complement(5364073..5376614)
AA seq 1279 aa
MAEDGLRLGGLSSGLAVLLNGEGSKENSLKTHLVSNCDDFGHRSVERSLEYVLGLPNKYV
SLLASPVDCNLVRCIIRNEFPKLHANSSVFRNRDGVCISGDGCTPHIIGLDESSIRGDIR
VIKPPSLIESLAMFSSARANAFVWKGKWMYEIILETSGIQQLGWATVSCPFTDHKGVGDA
DDSYAFDGRRVRKWNKEAEPYGQSWVVGDAIGCCIDLDCNEILFYRNGVSLGPAFHGIRK
MGPGSGYYPAVSLSQGERCELNFGARPFRFPIESYLPLQALPSLVPFATRLLHCLSRLLG
LHSVEQAKHSSVQKLRRLKRFVTHEELFYPVSRGVCEEIFSVLEADVWSTGYIAWGPFLS
FMMEVFGLQIPHDYSSLDRVLDVFLEFEGSHLLFEHFINALACGCKTALLVLEDCPCSGS
YPYLAVAIHILRRQELMVLWWKSPDFEFLFEGFLSRKNPNKHDLESMIPSVSWPGSSEDV
SYESSMLLTTRALSEAVSKIEEKHRDLCHLVIQFIPPVTPPQFPGSVFRTVLQNLLLKNR
GADRNLPPPGVSSNSVLVSLYTVILHFLSEGFGMGDICGQLKSSENGPDVGFLHRGGHRS
FPVGLFLRNDPHRNDSSRLGGSFSHLSKSNRVYDEETELIRWEEGCMDDEETRVTHSSIK
KPCCCSCYNDDFTKISKYPIRYTAKGSRVHCSSIPERSAHVATECSTGSLNDEIEDKPSS
SYQSESEFSYRSVQHMRFVPRESNMSSATLSEEELLDVLLLLYHIGLAPNFKQASYYMSH
QSQSISLMEEADKQIREKACSEQLKRLKEARNGYREEVIDCVRQCAWYRISLFSRWKQRG
MYATCMWTVQLLLVLTKVDLLFLYIPEYYLEALVDCFHVLRKSDPPFVPSSIFIKQGLAS
FIFECLVSQVTFVVTHFNDPRISSADLRDLLLQSISVLVQYKEYLSVFESNEAATQRMPK
ALLSAFDNRSWIPVTNILLRLCKGSGFGSSKQGESSSSSVVFQRLLGETCINDQELFSAF
LNRLFNTLSWTMTEFSVSVREMQKKYQVLEFQQKKCGVIFDLSCNLTKLLEFCTHAIPQA
FLSGAETNLRRLMELVVFILNHITSAEDAEFFDLSLRRLGQSIEKINRGMILAPLVGIIL
NLLNASEHMECREHNDVVSIFASMGCLDSFHCRFQYLVDYNWDGTCRGDAYLVKIAQLEN
FLSLLSQSQSQENAICRGEKDGDDGMCCICYAREADAQFSPCSHRSCYGCITRHLLNCHR
CFFCNATVVDVVLISEKTG
NT seq 3840 nt   +upstreamnt  +downstreamnt
atggcagaagacggcctacgacttggtgggctttcttctggtctagccgtgttattgaat
ggcgaaggcagtaaagagaattcgttgaaaacccatcttgtttcaaattgtgatgatttt
ggacaccgatcagtggagcgtagcttagaatatgttcttggtcttcctaacaaatatgtt
agtttgttggccagtccagttgattgcaatctagttcgttgtattatacggaatgaattc
cctaaactgcatgcaaattcaagtgtgtttagaaacagagatggagtttgtatttctgga
gatggttgtacaccccacatcattggtcttgatgaatccagtattcgtggtgatattaga
gtgattaaaccaccttcgcttatcgagagcttggcaatgttcagcagtgccagggctaat
gcttttgtgtggaaaggtaaatggatgtatgaaattattctagaaacttcaggaattcag
cagcttgggtgggcaactgtttcttgccctttcactgaccataagggtgtaggtgatgcg
gacgattcgtatgcatttgatgggaggagggttagaaaatggaacaaggaagctgagcca
tatggtcagtcatgggttgttggtgatgccattggttgctgcatagatttggattgtaat
gaaatattattctacagaaatggtgtctcacttgggcccgcatttcatggcattcgtaag
atgggaccaggatctggatattatcctgcagtttctctttctcaaggcgaaagatgtgaa
ttaaattttggtgctcgaccctttaggttccccattgaaagctacctcccccttcaggca
cttccatccttagttccgtttgctactcggttgctgcattgcttgtcaaggctgttgggt
ctgcactctgtggaacaggcaaagcactcttctgttcagaagttgaggagactgaagagg
tttgttacacatgaagaacttttttatcctgtttctcgtggcgtatgtgaggaaattttc
tcagtacttgaggcagatgtgtggagcacagggtacattgcctggggtccatttctgtca
ttcatgatggaagtgttcgggttgcagattccacatgattattcaagtttagatagagtt
cttgatgtctttctagaatttgaaggatcacatttgttgtttgaacatttcataaatgcc
ttggcttgtggttgcaaaacagctctgctggttctggaagattgcccatgttcagggtca
tacccataccttgcggtggcaatccacatcctgcgacgacaagagcttatggtgctttgg
tggaaatcacctgattttgaattcctttttgaagggtttctgtcacggaagaatccaaat
aagcatgaccttgaatccatgataccatctgtttcgtggcctggttcaagtgaggatgtg
tcatatgaaagtagcatgttgttgacaactagagctttatctgaagcagtcagtaagatt
gaggagaagcatagggatctctgtcacttggtcatacagtttataccacctgtgacacct
ccccagtttcctggttcagtgttcagaactgttttacagaaccttctactaaagaataga
ggagctgaccgcaatcttccacctcctggagtttcaagcaattctgttcttgtttctttg
tacactgttatacttcatttcttatctgaagggtttggcatgggagatatttgcggccag
ttgaaaagcagtgaaaatggccctgatgttggttttcttcataggggtggtcaccgaagc
tttcctgtaggtctatttcttagaaatgatcctcatcgaaatgacagttctcggcttgga
gggtcatttagtcatctttcaaaatcaaaccgggtatatgatgaagaaacagaactaatt
cggtgggaggaaggctgtatggatgatgaagaaaccagagtgactcattcaagtataaaa
aagccgtgttgttgctcatgctacaatgatgattttacaaaaatctcaaagtatccaatt
cgatacacagccaaaggttctcgtgtccattgcagttccattccagagagatctgcccat
gttgctacagaatgcagtactggaagtttgaatgatgaaatagaagataaaccgagctct
agttatcaatctgaatctgagtttagttatcgctcagtgcagcatatgaggtttgtacca
agggaaagtaatatgtcttcagctacactcagtgaagaagaacttctagatgttttgctg
ttgttatatcatataggccttgcaccaaattttaagcaggcatcatactacatgtctcac
cagtcacagtcaatatccctcatggaagaagctgataaacaaataagagaaaaagcttgc
agtgagcaattaaagcgtttgaaagaagctcgtaatggttatagagaagaagttattgat
tgtgtcagacaatgtgcttggtaccgtatttctctattttctcgatggaagcaaagagga
atgtatgcaacatgcatgtggactgtccagttgcttttggttcttaccaaagtcgatctg
ctgttcctttatatccctgaatattatctggaagctcttgtcgattgctttcatgtgttg
cgcaaaagtgatcctccatttgtaccttcatcaatatttatcaagcaaggccttgcttca
tttatttttgagtgtcttgtttcccaggtcacttttgtggtcacacacttcaacgatcct
cggatatcaagtgcggatcttagggatctgcttctccaatcaatctcagtcttggtacag
tacaaagaatatctgtctgtcttcgagagtaatgaagcagccacccagagaatgcctaag
gcattgctgtcagcatttgataatagatcctggattccagtgacaaacattcttctgcgt
ttgtgcaagggatctggctttggttcttcaaagcagggagaatcgtcgtcttcatccgtt
gtcttccagagattgttaggtgaaacatgtatcaacgatcaagaattgttctcagctttt
ctcaatcgcctatttaacactctcagctggacaatgactgaattctcagtttctgttaga
gaaatgcaaaagaagtaccaggtattagagttccagcaaaagaaatgcggtgtcatattt
gatctttcatgcaatttgacaaagcttttggagttctgtacccatgcgatacctcaagca
tttctgtctggagctgaaacaaaccttcgaaggttgatggagttggttgtctttattctg
aaccacataacttcagcagaagatgctgaattttttgacttgtcactgagacgacttggc
caatctatagaaaaaataaaccgagggatgatattggcaccccttgtaggcattatcttg
aatttgttaaatgccagcgaacatatggaatgcagggagcacaatgatgttgtgagcatc
tttgcaagcatgggttgccttgacagttttcattgcagattccagtacctagtggattac
aactgggatggaacctgtagaggtgatgcgtatcttgtaaaaattgcccagctagagaat
tttctgagccttctcagccagagccaatcacaagaaaatgcaatatgcaggggtgaaaag
gatggggatgatggcatgtgctgcatctgttacgcccgtgaagcagatgcccagttttca
ccttgttcgcacaggtcttgttatggttgcataaccaggcatcttttgaattgccacaga
tgttttttttgcaatgcaacagttgtggacgttgtcctgatcagtgagaagacgggttga

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