Malus sylvestris (European crab apple): 126629256
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Entry
126629256 CDS
T09027
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msyl03036
]
126629256
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126629256
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
126629256
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
126629256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
Motif
Other DBs
NCBI-GeneID:
126629256
NCBI-ProteinID:
XP_050155183
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Position
7:34005264..34015635
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AA seq
1348 aa
AA seq
DB search
MQRTPTKRSQVREDHGNKDVTYRFKVLLPNGMSVGLQLQNPEHKMPLGDFIQMLKREHHL
ALRESSSRKRKREIDWNAGGLFIEDANNREIRDVVNFKNFKAHECHILKLHDGNVSERVI
TFENMWDLTPVTDLLRELPQEYTSETALADLIDNSLQAVWANDRRHKKLISVDVADNVIS
IFDTGPGMDGSDKNSIVKWGKMGASLHRSFKDQAIGGTPPYLTPFFGMFGYGGPIASMQL
GRHALISSKTKDSRKVYTLHLDREALLSRSNSDSNWKTAGGMRDPLEEEMIRTPHGSFTK
VEIYKPKSKLDIDQLRCKLKDIYFPYIQCDEESKAGKIWKTVTPVNFEVNGVDLAEIAGG
EIATTNLHSSNGPDFVLQLHFFCKKNSMSQSPDSKTDIKANARLKCVYFPVVKGKENIER
ILESLESEGCSTSEKFETYSRVSIRRLGRLLPDARWALLPFMEFKQKKGDRAHLLKRCCL
RVKCFIETDAGFNPTPSKNDLAHHGPFTTALRNFGNQPLENENDIKIQISRDGKHLNLAQ
LKREYENWILQMHEQYDDEADCGEDQPVVVVSPINKKALHMSSEVARVHKSLKRKGIAWK
RGQKIKLLKGACAGVHKNNVYATIEYFLLEGLEGDSGGQAQMFCRPLSNPDAKGCILSIS
DGDTSLDVGGSLPVPVSVIDTGMCVAVGSTEWDNQLEKQRQKSPSTIDLLDAEQCQELDI
NGALPVDAQAGKDPPEAIVAIVRPASYDSSCNSKTLDQKHIAKTNLQMSMKVKFSSDAEG
LQRVHDISVSVAPKSLKGFQGLYIFPLKSKYPDLFQNAGIYTFSFHLDESDCKAIEKKVL
IKEARKVEYKQIHSTFPKEKVSRPQDSSDSPNLQDESNGKSVEKKVLIKEARKVEYKQIQ
STSPKENVLGSQYSSHSPKVEKLQVLVKRAKVEYNESQVPLSPGKVLPLQDYSSLQKGGN
FQVSEMQVPKVEYEELSPFPLLLQDPSSLQQVENLQKKENDIKRIGLHIGDLEKQLVELN
ENKEILELEIAHLQACYQLSSSDYSSKKEELRNHIERMSHTAASTVSTLSRVPLQGPDND
FMGSMIGLVALLGRVRNFKLSRILSEYLGEDQMLAVVCKSFTAACALEKYHRSGEVDSRH
ALYAEAAKLERSIDSRFLVICLEDLRPYTGDFDGTDPQRKLFLPDPVLPSGDTPSGFLGY
AVNLVDLDDEHLHTVTTEGHNLRQTLFYSLFGELHVYRTRKQMFNARACIKQAAVSLDGG
ILKQTGMVSLGYGNPKICFPILVNVAEVLEEIAVNEEAKSEVVAAMEEIAKDREKVLTKL
RKKLKKQQKLITKTGEEFQKKMSAVDYS
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggacaccaacaaagaggagccaagtgcgcgaagatcacggcaataaggacgtg
acgtatagattcaaggtgctgttgccaaatggcatgagtgttgggttgcaattgcaaaac
cctgagcacaaaatgccacttggagatttcattcagatgctgaaaagggagcatcacctg
gccttgagagaatctagctcgaggaagcggaagcgggagattgattggaatgctggcggt
ttatttattgaagatgccaataaccgggagataagggatgtggtgaatttcaagaacttc
aaggcacatgagtgccacattctgaagcttcatgatggtaatgtgtctgagagagttatt
acttttgagaatatgtgggatttgacacctgttactgatctactaagggaattaccgcaa
gagtacacgtctgagactgctctggcggatctgattgataattcccttcaagctgtttgg
gcaaatgacaggagacataagaagcttataagtgtggatgtggctgataatgtgatctca
atttttgacactggccctgggatggatggaagcgataaaaattctatagtgaagtgggga
aagatgggtgcttcacttcatagatcttttaaggaccaggcgatagggggcacacctccg
tacttaacgccattttttggaatgtttggatatggtggacctatagcgtctatgcaatta
gggaggcatgcattaatttcttccaagacaaaggattccaggaaagtttatacattacat
cttgatagagaggctttactgagcaggtcaaactctgattctaattggaagactgctggt
ggcatgagggatcctttagaagaagaaatgatcagaacaccacacggtagctttacaaag
gttgaaatttataaaccaaaatcgaaattggacatagatcaactccgatgcaagctgaag
gacatatatttcccgtatattcagtgtgatgaagaatccaaagcagggaagatttggaag
accgtaacaccagtaaactttgaggttaatggtgttgatttagctgagattgcaggtggg
gagattgcaacaactaacttgcattcatccaatggtcctgattttgttttacagcttcat
ttcttctgtaagaaaaacagtatgtctcaatctccagattcaaagacagatattaaagct
aatgctcgccttaagtgtgtctattttcctgttgttaagggaaaagagaatattgagaga
attttggagagtttagaatctgagggatgcagcacctcagaaaaatttgaaacctatagt
cgtgtctctattcggaggcttggtcgcctacttccagatgctcgttgggctttgcttcct
ttcatggaattcaagcaaaaaaaaggagacagggcacacttgttgaaaagatgttgtttg
agagttaaatgctttatcgagactgatgctggtttcaatccaacaccatctaagaatgat
cttgcacaccatggtccttttaccactgcactgaggaacttcggtaatcagcctctggag
aatgaaaatgatatcaaaattcaaatttctagagatggaaagcatttaaatcttgctcaa
ctaaaaagggagtatgagaattggattcttcaaatgcatgagcagtatgatgatgaagct
gactgtggtgaagatcaaccagtggttgttgtcagtcctataaacaaaaaggcacttcat
atgtcatctgaagttgcaagggtgcataaatctctaaagaggaaaggaatagcctggaaa
cgtggccagaaaatcaaacttcttaagggagcatgtgctggggtccataagaacaatgtc
tatgctacgattgaatattttttgcttgaaggtctcgaaggtgactctggtggtcaggct
caaatgttctgcaggcctttaagtaatccagatgcgaagggatgcatcctttccataagt
gatggggataccagtttagatgttggtggctccttgcctgtacctgtcagtgtcattgat
actggaatgtgtgtagctgttggaagtaccgagtgggataaccaacttgagaaacaacgt
cagaaatctccttctacaattgatttgctggatgcagaacaatgtcaagagttggacatt
aatggggcactgcctgtagatgcccaagctggaaaagatcctccagaagcaattgtggcc
attgttcgtcctgccagttatgactcttcttgtaattccaagaccctggaccagaagcat
attgccaaaactaatttacaaatgtccatgaaagttaagtttagcagtgatgctgagggt
cttcaaagagttcacgacatttcagtgtccgtagcacccaagtcactaaaaggatttcaa
gggttatacatctttccacttaaatcaaagtacccagatttatttcaaaatgctggtatc
tatacattttcattccatcttgatgagtcagattgtaaggctattgagaaaaaagtgctt
atcaaggaagctcgaaaagtggagtacaaacaaattcactcgactttcccaaaggaaaag
gtttcacggccccaagattcatctgactctcccaacttacaggatgagtcaaatggcaag
agtgttgagaaaaaagtacttatcaaggaagctcgaaaagtggagtataaacaaattcaa
tcgacttccccaaaggaaaatgttttgggatcccaatattcatctcacagtcccaaagta
gaaaagttacaggttcttgtaaaaagagcaaaagtggagtacaatgagagtcaggttccg
ttgtcacctggcaaggttttgcctcttcaagattactcttccctccagaaaggaggaaac
tttcaggtttcagaaatgcaagttccaaaagtggagtacgaagaactatccccatttcct
ttgcttctccaagatccatcttcccttcagcaagtagaaaaccttcagaaaaaggagaat
gacattaaacgaattggattgcacattggagatctggaaaagcaattggttgagcttaat
gagaacaaggaaattcttgagctagaaatagctcatttgcaagcttgttatcaactgagc
agttcagattactcatcaaagaaagaagagctgagaaaccacatagagagaatgagccac
acggcagcttctactgtctccaccctttcaagagttccactccaagggccagacaacgat
ttcatgggaagcatgatcggtttagttgctctgctgggcagagttcggaactttaagctc
agcaggatattatctgagtacttgggtgaagatcagatgctcgctgttgtctgtaaatca
ttcacagctgcttgtgctctcgagaagtatcaccgcagtggggaagttgattctaggcat
gctctttatgcagaagctgctaaacttgagagatccatagatagccggtttcttgttata
tgcctcgaagatctacggccttacacaggtgactttgatggtactgaccctcaaaggaag
ctcttcttgccagatcctgtactgccaagtggagataccccgtctggtttcttggggtat
gcagttaatctggttgacctagatgacgagcatttacacaccgtgacaactgaaggccat
aatctgcggcagacattgttttattctcttttcggcgagctccatgtctacagaactagg
aaacaaatgttcaatgctcgtgcttgtatcaaacaagctgctgtatctttggatggcggg
attttaaaacaaaccgggatggtttctcttggatacgggaatccaaaaatctgtttcccg
attttggtgaatgtcgcggaagtcctggaggaaattgcagtaaacgaggaagcaaagagt
gaggtcgttgctgccatggaggaaattgccaaggaccgcgagaaagtgttgacgaagctc
agaaagaaattgaagaagcaacagaagctgataacaaagaccggggaggagtttcaaaag
aaaatgagtgcagtagactacagttga
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