KEGG   Malus sylvestris (European crab apple): 126630961
Entry
126630961         CDS       T09027                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34 isoform X1
  KO
K10144  RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126630961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msyl04121]
    126630961
Enzymes [BR:msyl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126630961
Ubiquitin system [BR:msyl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126630961
SSDB
Motif
Pfam: zinc_ribbon_6 zf-CHY zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4 zf-RING_11 Spindle_Spc25
Other DBs
NCBI-GeneID: 126630961
NCBI-ProteinID: XP_050157083
LinkDB
Position
8:complement(12182643..12187377)
AA seq 303 aa
MQDIMVRQNIMGDAHCNLSNGEYKLKLESKVTGEATELLEKGYMQYGCPHYRRRCSIRAP
CCNEIFDCRHCHNEAKNDISVDQKHRHDMPRHQVKQVICSLCDTEQEVQQVCVNCGVCMG
KYFCETCKLFDDDADKPFWFCLQVSKKQYHCNGCGICRIGGRENFYHCYKCGCCYSVLLK
NSHPCVEGAMHHDCPVCFEFLFETRNDVTVMPCGHTIHKNCLKEMRDHYQYACPLCSKSV
CDMSKVWEKYDIEIAAQPMPEPYQNRLVSILCNDCGKSSQVQYHVVARKCLNCKSYNTRQ
TRG
NT seq 912 nt   +upstreamnt  +downstreamnt
atgcaagatataatggttaggcagaacataatgggggatgcccactgtaatctatcaaat
ggcgagtataagctcaaacttgaatcgaaggttactggggaggccactgaattgctagag
aaaggatacatgcagtatggatgtccacactatcggcgaaggtgcagtattagagctcct
tgctgcaatgagatttttgattgtcgccattgtcataatgaagctaagaatgatattagt
gttgatcagaagcatagacatgacatgccgcgtcatcaagtgaaacaggtgatatgttca
ctttgcgacactgagcaagaggttcaacaagtttgtgtcaactgtggtgtatgtatgggg
aaatacttctgtgagacttgcaagctatttgatgatgatgcggataaacctttttggttt
tgtttgcaggtatctaagaaacagtaccattgcaatggctgtgggatttgcagaattggg
gggcgcgagaatttctatcactgctacaagtgtggttgctgctactcagtgctgttgaag
aacagccacccctgtgtggagggagcaatgcatcacgactgccctgtttgctttgagttc
ttattcgaaacaagaaatgatgttaccgtcatgccatgtgggcacacaattcacaagaat
tgcttaaaagagatgagggatcattatcaatatgcttgccctctttgctccaagtcagtt
tgcgatatgtctaaggtatgggagaaatatgacatagagattgcagctcaaccgatgcct
gaaccctatcaaaacagattggtttcgatcctctgcaacgactgcgggaaaagctcacag
gtgcagtaccatgttgtggcccggaaatgtctgaactgtaaatcttacaacactcgccaa
acgagaggctga

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