Malassezia sympodialis: MSY001_1529
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Entry
MSY001_1529 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
msym
Malassezia sympodialis
Pathway
msym03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MSY001_1529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msym03041
]
MSY001_1529
Spliceosome [BR:
msym03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MSY001_1529
Complex C
U5 SnRNP specific factors
MSY001_1529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
Roc
SRPRB
Motif
Other DBs
NCBI-GeneID:
30056414
NCBI-ProteinID:
XP_018740104
UniProt:
M5EMC1
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MDDYDEFGNYIGPLSESDSGDEVVETVPEEPVAPPPPVELDEAPEPEEQAVAMRVDEDTS
QAVVLHEDKVYYPSAAEVYGEDVETLVQEEDAQPLTQPIMEPERERRFAVEEKELPAVRF
DREFMRNLMDYPEMVRNVAIVGHLHHGKTALVDMLVEETHVLEVDAEVPLRYTDTHVLEQ
SRGLSIRATPISLVLPTSKGKSHLLHMLDTPGHTNFQDEVATAVRLADGVVLVVDAVEGA
MCNTAAIVRFCVREQRPMTLVVNKIDRLVLELRLPPAEAYFKLQHTIEEVNRIVGEASGD
PGLRFAPERGNVAFASTQVGYCFTLQSFAQLYAERVPVDTAAFAQRLWGHIYYDASKRTF
TRHAPHADAKRSFVQFVLEPLYKLYSLVLSADTDTLRRTLATLQIQLPAAAYKIGVRPLL
KLVLNRFLGRASGLIDMVVTHLPSPTEGAAWQARTCTGPSDGLLCTAAARCDAAGPLLVH
VAKLYPTADARAFRALGRVLSGTVVQGASVKVLGPSYAPDDEEDMALATVEGVALPGARY
TVAAARVPAGNWVLLSGVDASIAKAATICGVDVPVPETFVLQPVQHLTESVLKVAIEPLH
PAELPKMLDGLRKVNKCYPLVSTRVEESGEHTLLGTGELYLDCVMHDLRCLYADMEIKIS
DPVVRFCETVIETSAVQCYANTPNQQNRLTLVAEPLEPALADDLEQGRLDVRLPPRTLAR
VLEERYGWDKLAARSVWAFGPDEHGPNVLVDDTLPDEVDKTQLYAVREHIRQGFQWATRE
GPLCDEPMRGVKIRLTHASIAAEPIQRGGGQLIPTARRATYAAFLLAAPRLLEPIFLAEI
QTPAEGVSALYTLLARRRGHVTQEVPKAGTPLVTVHALLPAMDASGFETDLRVMTQGQAF
CLQMFDHWAVVPGDPNDTSVPLRPLEPAPPLGLARDFVLKMRRRKGLADTVAVASYLERD
MAVALAQAGMDIA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacgacgagttcgggaactacatcgggcctctatcggaatcggactcgggc
gacgaggtggtggagacggtgcccgaggagcccgtggcgcccccgccgccggtcgagctg
gacgaggcgccggagcccgaggagcaggccgtcgcgatgcgcgtggacgaggacacgtcg
caggccgtcgtgctgcacgaggacaaggtgtactacccgtctgcggcggaggtgtatggc
gaggacgtagagacgctcgtgcaggaggaggacgcgcagccactgacgcagccgatcatg
gagccggagcgtgagcggcgctttgccgtcgaggagaaggagctgccagcagtgcgcttc
gaccgtgagtttatgcgcaacttgatggactaccccgagatggtgcgcaacgtcgccatt
gtcgggcacttgcaccacggcaagacggcgctggtcgatatgctcgtggaagagacccac
gtgcttgaagtcgatgcggaagtcccgctgcggtacacggacacgcatgtgctcgagcag
tcgcgcggcctctcgatccgcgcgacgcccatctcgctcgtgctgccgacctcgaagggc
aagagtcacctgctgcacatgctggacacgccagggcacaccaacttccaggacgaggtc
gcgaccgccgtgcgcctcgcggacggcgtcgtgctcgtcgtcgacgccgtcgagggcgcc
atgtgcaataccgccgccatcgtgcgcttctgtgtgcgcgagcagcggcccatgaccctg
gtcgtgaacaagatcgaccgcctcgtgctcgagctgcgcctcccgccggccgaggcgtac
ttcaagctgcagcacacgatcgaggaggtgaatcgcatcgtcggcgaggccagcggcgac
cctggcctgcgctttgcgcccgagcgcggcaacgtggcgtttgcaagtacgcaggtcggc
tactgctttacgctgcagagcttcgcgcagctctacgcggagcgcgtacccgtggatacc
gccgcgttcgcgcagcgcctgtggggccacatctactacgacgcgtccaagcgcaccttt
acgcgccatgcgccgcacgcggacgccaagcgcagcttcgtgcagtttgtgctggagccg
ctgtacaaactgtacagcctcgtgctcagcgccgataccgatacactgcggcgcactctc
gcgacgctgcagatccagctgccggccgccgcctacaagatcggcgtgcgccccctgctg
aagctcgtgctgaaccgcttcctcgggcgcgcgtcgggccttatcgatatggtcgtcaca
cacctgccgagccccacggagggcgctgcgtggcaggcgcgcacctgcacgggcccgtcc
gacggcctgctgtgcacggccgcggcgcggtgcgacgccgcgggccccctgctcgtgcac
gtggcgaagctgtacccgaccgcggatgcgcgggcgttccgcgcgctgggtcgcgtgctg
agtggtactgttgtgcagggcgcgtcggtcaaggtgctgggcccgtcatacgcgcccgac
gacgaggaggatatggcgctcgcgaccgtcgagggcgtggcgctgccgggcgcgcggtac
acggtcgcggcggcgcgtgtgccggccggcaactgggtgctgctgagcggcgtcgacgca
tccatcgccaaggccgcgacgatctgcggcgtggacgtgccggtgcccgagacgtttgtg
ctgcagcctgtgcagcacctcacagagagcgtgctcaaggtggcgatcgagccgctacac
cctgccgagctgcccaagatgctcgatggcctgcgcaaggtgaacaagtgctaccccctc
gtgtctacgcgcgtcgaggagagtggggagcacacgctgctgggcacgggcgagctgtac
ctggactgtgtgatgcacgacctgcggtgcctgtatgcggacatggagatcaagatcagc
gatcctgtcgtgcggttctgtgagacggtgatagagacgagcgccgtgcagtgctacgcg
aacacgccgaaccagcagaaccgactcacgctggtcgccgagccgctcgagccggcgctc
gcggacgacctcgagcagggtcgtctcgacgtgcggctcccgccgcggacgctcgcgcgt
gtgctggaagagcgctacggctgggacaagctggccgcgcgctcggtgtgggcgtttggg
ccggacgagcacgggccgaacgtgctcgtggacgacacgctgcccgacgaggtcgacaag
acgcagctctacgcggtgcgcgagcacatccggcagggcttccagtgggccacgcgcgag
gggccgctgtgcgacgagccgatgcgcggcgtcaagatccgcctcacgcacgcgagcatt
gccgcggagccgatccagcgcggcggtgggcagctgattcccacggcgcgccgtgcgacg
tacgccgccttcctgctcgcggcgccgcgcctcctcgagccgatcttcctcgccgagatc
caaacgcccgccgagggcgtcagcgctctctacacgctgctcgcgcggcgccgcgggcac
gtgacgcaggaggtgcccaaggccggcacgccgctcgtcacggtgcatgcactgctcccg
gcgatggacgcgagtggctttgagacggatctgcgtgtcatgacgcagggccaggcattc
tgtctacagatgtttgaccactgggccgtcgtgccaggcgacccgaacgacacctccgtc
ccgctgcgcccgctcgagccggcgccgccgctgggtctcgcacgtgatttcgtgctcaag
atgcgccgccgcaagggtctggcggacaccgtggcggtcgcctcgtacctcgagcgcgat
atggcggtggcgctcgcgcaggccggcatggacatcgcttga
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