KEGG   Malassezia sympodialis: MSY001_1529
Entry
MSY001_1529       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
msym  Malassezia sympodialis
Pathway
msym03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MSY001_1529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msym03041]
    MSY001_1529
Spliceosome [BR:msym03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    MSY001_1529
 Complex C
   U5 SnRNP specific factors
    MSY001_1529
SSDB
Motif
Pfam: GTP_EFTU EFTUD2 EFG_IV EFG_C GTP_EFTU_D2 MMR_HSR1 EFG_III EFL1 Roc SRPRB
Other DBs
NCBI-GeneID: 30056414
NCBI-ProteinID: XP_018740104
UniProt: M5EMC1
LinkDB
Position
Unknown
AA seq 973 aa
MDDYDEFGNYIGPLSESDSGDEVVETVPEEPVAPPPPVELDEAPEPEEQAVAMRVDEDTS
QAVVLHEDKVYYPSAAEVYGEDVETLVQEEDAQPLTQPIMEPERERRFAVEEKELPAVRF
DREFMRNLMDYPEMVRNVAIVGHLHHGKTALVDMLVEETHVLEVDAEVPLRYTDTHVLEQ
SRGLSIRATPISLVLPTSKGKSHLLHMLDTPGHTNFQDEVATAVRLADGVVLVVDAVEGA
MCNTAAIVRFCVREQRPMTLVVNKIDRLVLELRLPPAEAYFKLQHTIEEVNRIVGEASGD
PGLRFAPERGNVAFASTQVGYCFTLQSFAQLYAERVPVDTAAFAQRLWGHIYYDASKRTF
TRHAPHADAKRSFVQFVLEPLYKLYSLVLSADTDTLRRTLATLQIQLPAAAYKIGVRPLL
KLVLNRFLGRASGLIDMVVTHLPSPTEGAAWQARTCTGPSDGLLCTAAARCDAAGPLLVH
VAKLYPTADARAFRALGRVLSGTVVQGASVKVLGPSYAPDDEEDMALATVEGVALPGARY
TVAAARVPAGNWVLLSGVDASIAKAATICGVDVPVPETFVLQPVQHLTESVLKVAIEPLH
PAELPKMLDGLRKVNKCYPLVSTRVEESGEHTLLGTGELYLDCVMHDLRCLYADMEIKIS
DPVVRFCETVIETSAVQCYANTPNQQNRLTLVAEPLEPALADDLEQGRLDVRLPPRTLAR
VLEERYGWDKLAARSVWAFGPDEHGPNVLVDDTLPDEVDKTQLYAVREHIRQGFQWATRE
GPLCDEPMRGVKIRLTHASIAAEPIQRGGGQLIPTARRATYAAFLLAAPRLLEPIFLAEI
QTPAEGVSALYTLLARRRGHVTQEVPKAGTPLVTVHALLPAMDASGFETDLRVMTQGQAF
CLQMFDHWAVVPGDPNDTSVPLRPLEPAPPLGLARDFVLKMRRRKGLADTVAVASYLERD
MAVALAQAGMDIA
NT seq 2922 nt   +upstreamnt  +downstreamnt
atggacgactacgacgagttcgggaactacatcgggcctctatcggaatcggactcgggc
gacgaggtggtggagacggtgcccgaggagcccgtggcgcccccgccgccggtcgagctg
gacgaggcgccggagcccgaggagcaggccgtcgcgatgcgcgtggacgaggacacgtcg
caggccgtcgtgctgcacgaggacaaggtgtactacccgtctgcggcggaggtgtatggc
gaggacgtagagacgctcgtgcaggaggaggacgcgcagccactgacgcagccgatcatg
gagccggagcgtgagcggcgctttgccgtcgaggagaaggagctgccagcagtgcgcttc
gaccgtgagtttatgcgcaacttgatggactaccccgagatggtgcgcaacgtcgccatt
gtcgggcacttgcaccacggcaagacggcgctggtcgatatgctcgtggaagagacccac
gtgcttgaagtcgatgcggaagtcccgctgcggtacacggacacgcatgtgctcgagcag
tcgcgcggcctctcgatccgcgcgacgcccatctcgctcgtgctgccgacctcgaagggc
aagagtcacctgctgcacatgctggacacgccagggcacaccaacttccaggacgaggtc
gcgaccgccgtgcgcctcgcggacggcgtcgtgctcgtcgtcgacgccgtcgagggcgcc
atgtgcaataccgccgccatcgtgcgcttctgtgtgcgcgagcagcggcccatgaccctg
gtcgtgaacaagatcgaccgcctcgtgctcgagctgcgcctcccgccggccgaggcgtac
ttcaagctgcagcacacgatcgaggaggtgaatcgcatcgtcggcgaggccagcggcgac
cctggcctgcgctttgcgcccgagcgcggcaacgtggcgtttgcaagtacgcaggtcggc
tactgctttacgctgcagagcttcgcgcagctctacgcggagcgcgtacccgtggatacc
gccgcgttcgcgcagcgcctgtggggccacatctactacgacgcgtccaagcgcaccttt
acgcgccatgcgccgcacgcggacgccaagcgcagcttcgtgcagtttgtgctggagccg
ctgtacaaactgtacagcctcgtgctcagcgccgataccgatacactgcggcgcactctc
gcgacgctgcagatccagctgccggccgccgcctacaagatcggcgtgcgccccctgctg
aagctcgtgctgaaccgcttcctcgggcgcgcgtcgggccttatcgatatggtcgtcaca
cacctgccgagccccacggagggcgctgcgtggcaggcgcgcacctgcacgggcccgtcc
gacggcctgctgtgcacggccgcggcgcggtgcgacgccgcgggccccctgctcgtgcac
gtggcgaagctgtacccgaccgcggatgcgcgggcgttccgcgcgctgggtcgcgtgctg
agtggtactgttgtgcagggcgcgtcggtcaaggtgctgggcccgtcatacgcgcccgac
gacgaggaggatatggcgctcgcgaccgtcgagggcgtggcgctgccgggcgcgcggtac
acggtcgcggcggcgcgtgtgccggccggcaactgggtgctgctgagcggcgtcgacgca
tccatcgccaaggccgcgacgatctgcggcgtggacgtgccggtgcccgagacgtttgtg
ctgcagcctgtgcagcacctcacagagagcgtgctcaaggtggcgatcgagccgctacac
cctgccgagctgcccaagatgctcgatggcctgcgcaaggtgaacaagtgctaccccctc
gtgtctacgcgcgtcgaggagagtggggagcacacgctgctgggcacgggcgagctgtac
ctggactgtgtgatgcacgacctgcggtgcctgtatgcggacatggagatcaagatcagc
gatcctgtcgtgcggttctgtgagacggtgatagagacgagcgccgtgcagtgctacgcg
aacacgccgaaccagcagaaccgactcacgctggtcgccgagccgctcgagccggcgctc
gcggacgacctcgagcagggtcgtctcgacgtgcggctcccgccgcggacgctcgcgcgt
gtgctggaagagcgctacggctgggacaagctggccgcgcgctcggtgtgggcgtttggg
ccggacgagcacgggccgaacgtgctcgtggacgacacgctgcccgacgaggtcgacaag
acgcagctctacgcggtgcgcgagcacatccggcagggcttccagtgggccacgcgcgag
gggccgctgtgcgacgagccgatgcgcggcgtcaagatccgcctcacgcacgcgagcatt
gccgcggagccgatccagcgcggcggtgggcagctgattcccacggcgcgccgtgcgacg
tacgccgccttcctgctcgcggcgccgcgcctcctcgagccgatcttcctcgccgagatc
caaacgcccgccgagggcgtcagcgctctctacacgctgctcgcgcggcgccgcgggcac
gtgacgcaggaggtgcccaaggccggcacgccgctcgtcacggtgcatgcactgctcccg
gcgatggacgcgagtggctttgagacggatctgcgtgtcatgacgcagggccaggcattc
tgtctacagatgtttgaccactgggccgtcgtgccaggcgacccgaacgacacctccgtc
ccgctgcgcccgctcgagccggcgccgccgctgggtctcgcacgtgatttcgtgctcaag
atgcgccgccgcaagggtctggcggacaccgtggcggtcgcctcgtacctcgagcgcgat
atggcggtggcgctcgcgcaggccggcatggacatcgcttga

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