Methylocaldum szegediense: MSZNOR_4747
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Entry
MSZNOR_4747 CDS
T09668
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
msze
Methylocaldum szegediense
Pathway
msze03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSZNOR_4747 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_4747 (nth)
Enzymes [BR:
msze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSZNOR_4747 (nth)
DNA repair and recombination proteins [BR:
msze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSZNOR_4747 (nth)
Prokaryotic type
MSZNOR_4747 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
HHH_8
HTH_Crp_2
DUF7178
Motif
Other DBs
NCBI-ProteinID:
CAI8965056
LinkDB
All DBs
Position
MSZNORmain:complement(4573964..4574644)
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AA seq
226 aa
AA seq
DB search
MNAEKRRLIFERLAAAIPEPTTELKHSTPFELLIAVVLSAQATDKGVNKATARLFPVANT
PEAILALGEEGLKEYIKTINLYPTKARNIIAMCRVLLEKHNGQVPQTREELMALPGVGRK
TANVILNTAFDQHTIAVDTHIFRVANRTRLATGKTVLEVERKLERTVPRQYFKNAHHLLI
LHGRYTCVARKPKCPICPIADLCEYPDKTSEETFANSQKMVGTIKH
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgaaaagcgcagactgatcttcgagcgattggccgcggccattccggaaccc
actaccgaactcaagcactcgacaccgttcgaactgctgatcgcagtggtcctgtcggcc
caggcgaccgacaagggcgtcaacaaggccaccgctcgattattcccggtcgcgaacact
cctgaagccattctcgccttaggcgaagagggtctaaaggaatacatcaagactattaat
ctctaccctaccaaggcccggaacatcatcgcgatgtgccgagtgctattggagaaacac
aacgggcaagtaccgcaaacacgggaagaattgatggcgctgcccggcgtcggccgaaaa
accgccaacgttatcctcaataccgcatttgaccagcatacgatcgccgtagacacccac
atcttccgtgtcgcgaaccgaacccgcctcgcaaccggcaaaacggtactggaggtcgag
cgaaaactggagcgcacggttcccagacaatacttcaagaatgctcaccaccttctcatc
ctacacggccgctatacctgcgttgcccgaaaaccgaaatgccctatctgccccatcgcc
gacctatgcgaatacccggacaaaacatccgaagaaacttttgccaattcccaaaaaatg
gtcgggacgataaaacattag
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