Methylobacterium tardum: M6G65_20525
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Entry
M6G65_20525 CDS
T08338
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
mtad
Methylobacterium tardum
Pathway
mtad00909
Sesquiterpenoid and triterpenoid biosynthesis
mtad01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mtad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
M6G65_20525 (shc)
Enzymes [BR:
mtad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
M6G65_20525 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
M6G65_20525 (shc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Pec_lyase
TED_complement
Motif
Other DBs
NCBI-ProteinID:
URD34936
LinkDB
All DBs
Position
complement(4309650..4311647)
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AA seq
665 aa
AA seq
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MREAVSKVEALQRSKTQGISLDDVERGVAHATRALTALAHDDGHICFELEADATIPSEYV
LFHHFRGTQVADGLEAKIGNYLRRTQGRHGGWALVHEGPFDMSCTVKAYFALKMIGDDIE
APHMRRAREGILSRGGAANANVFTRFMLALYGEVPWRAVPVMPVEVMFLPKWFPFHLDKI
SYWARTTVVPLFVLQATKPRARNPRGISVQELFVTPPESVRTWPGSPHATWPWTPIFGFI
DRVLQRVENHLPRKSRQRAMEKARAWVSERLNGEDGLGAIFPAMVNSVLMYEVMGYRPDH
PQVRVACDAIEKLVAEKADEAYVQPCVSPVWDTALASHALLEAGGPEAEAQARAGLDWLK
PRQVLDIVGDWAARKPKVRPGGWAFQYANAHYPDLDDTAVVVMAMDRAMHQHGLVAGMPD
YKASITRAREWVEGLQSEDGGWAAFDADNNHMYLNHIPFSDHGALLDPPTADVTARVVGM
LAQLGETRETSRALDRGVNYLLNDQEEDGSWYGRWGMNFIYGTWSVLCALNAAGVDPADP
RIQRAVSWLIRIQNPDGGWGEDASSYKIDPAFEPGSSTASQTAWALLALMAAGAVGDPAV
TRGINFLTRTQGADGFWKEERYTATGFPRVFYLRYHGYPKFFPLWAMARFRNLKRGNSRR
VQFGM
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggccgtaagcaaagtcgaggcgctgcagcgctcgaagacgcaggggatctcg
ctcgacgatgtcgagcgcggcgtggcgcatgcgacgcgcgcactgaccgccctggcgcat
gacgacgggcatatctgcttcgagctcgaggcggatgcgacgatcccgtccgagtacgtg
ctgttccaccatttccgcggcacgcaggtcgccgacggccttgaggccaagatcggcaac
tacctgcgccgcacgcaaggcaggcatggcggctgggccctcgtccacgagggaccgttc
gacatgagctgcacggtcaaggcgtatttcgccctcaagatgatcggcgacgacattgag
gcgccgcacatgcgccgggcgcgcgagggcatcctgtcccgcggtggcgccgccaacgcc
aacgtgttcacccgcttcatgctggcgctctacggcgaggtgccgtggcgcgccgtgccg
gtgatgccggtcgaggtgatgttcctgccgaagtggttccccttccacctcgacaagatc
agctactgggcgcgcaccaccgtggtgccgctgttcgtgctccaggcgaccaagccgcgg
gcccggaacccgcgcgggatcagcgtgcaggagctgttcgtgacgccgcccgagagcgtg
cgcacctggccgggctccccgcacgccacgtggccgtggacgccgatcttcggcttcatc
gaccgggtgctgcagcgggtcgagaatcacctgccgcgcaagagccggcagcgcgccatg
gagaaggcccgcgcctgggtcagcgagcgcctgaacggcgaggacggcctgggggcgatc
ttccccgccatggtcaactcggtgctgatgtacgaggtgatgggctaccgccccgatcac
ccgcaggtccgcgtcgcctgcgacgccatcgagaagctcgtcgccgagaaggccgacgag
gcctacgtccagccctgcgtctcgccggtctgggacacggcgctggcgagccatgctctt
ctggaggccggcggtcccgaggccgaggcccaggcccgcgccggcctcgactggctgaag
ccccgccaggtgctcgacatcgtcggcgactgggcggcgcgcaagccgaaggtccggccc
ggtggctgggcgttccagtacgccaacgcccactaccccgatctcgacgacaccgccgtc
gtggtgatggccatggaccgggccatgcaccagcacggcctcgtcgccggcatgccggac
tacaaggcctccatcacccgcgcccgcgaatgggtcgaggggctgcagtccgaggatggc
ggctgggcggcattcgacgccgacaacaaccacatgtacctcaaccacatcccgttctcg
gatcacggcgcgctgctcgatccgccgaccgcggacgtgaccgcccgcgtggtcgggatg
ctggcccagctcggcgagacccgcgagacctcccgggcgctcgaccgcggcgtgaactac
ctcctcaacgaccaggaggaggacggctcctggtacggccgctggggcatgaacttcatc
tacggcacgtggtcggtgctctgcgccctcaacgccgccggggtcgatccggccgatccg
cggatccagcgggcggtctcgtggctgatccgcatccagaacccggatggcggctggggc
gaggacgcctcttcgtacaagatcgatccggccttcgagcccggctcgtccacggcctcg
cagaccgcctgggcgctgctcgccctgatggccgcgggcgccgtcggcgacccggccgtg
acccggggcatcaacttcctcacccgcacgcagggcgcggacgggttctggaaggaggag
cgctacaccgccacgggcttcccgcgggtgttctacctgcggtatcatggttacccgaag
ttcttcccgctctgggcgatggcgcgcttccgcaacctgaagcgcggcaacagccggcgc
gtccagttcggcatgtga
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integrated database retrieval system
