Meiothermus taiwanensis: Mtai_v1c12900
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Entry
Mtai_v1c12900 CDS
T05633
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mtai
Meiothermus taiwanensis
Pathway
mtai03030
DNA replication
mtai03410
Base excision repair
mtai03420
Nucleotide excision repair
mtai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mtai_v1c12900
03410 Base excision repair
Mtai_v1c12900
03420 Nucleotide excision repair
Mtai_v1c12900
03430 Mismatch repair
Mtai_v1c12900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtai03032
]
Mtai_v1c12900
03400 DNA repair and recombination proteins [BR:
mtai03400
]
Mtai_v1c12900
Enzymes [BR:
mtai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Mtai_v1c12900
DNA replication proteins [BR:
mtai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mtai_v1c12900
DNA repair and recombination proteins [BR:
mtai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Mtai_v1c12900
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mtai_v1c12900
MMR (mismatch excision repair)
DNA ligase
Mtai_v1c12900
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mtai_v1c12900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
PTCB-BRCT
HHH
5_3_exonuc
BRCT_2
DNA_ligase_ZBD
DUF445
Motif
Other DBs
NCBI-ProteinID:
AWR86532
LinkDB
All DBs
Position
complement(1330564..1332564)
Genome browser
AA seq
666 aa
AA seq
DB search
MQTPKQRIAELRELIRYHNYRYYVLNKPEISDAEFDRLLHELRTLEEAHPELVTPDSPTQ
TVGSSILETPFTPVPHPTRMYSLGNAFSPDDIADFEASINRFLGREEPREYVLEYKIDGL
SVNLLYEAGVFRQGLTRGDGLTGEDVTPNLLAIPDIPRRLPQPLDLEVRGEIYLPIQTFL
QLNAQLEEAGEPPFKNPRNAAAGSLRQKDPRISASRGLRGLFYGVGRPEGLGASTQQELL
EKLGQLGFSVDPHYQVVQGVEGIERGYRAMLAARKSLPFEADGVTVKLNNLSLWNELGYT
AKTPRFAIAYKFPAEEKTTRVLRVIFQVGRTGRVTPVAELEPVFLDGSTVSRVTLHNESY
VQELGLRIGDTVLVHKSGGVIPEVLRVVSEAPRGHAPVEWPSHCPECRTALELSGKIHLC
PNPLCPAKAFEAIRHFASRRAMDIQGLGEKLIEQLLEAGLVRDAADLYRLKKEDIIALER
KAEKSAQNLIEQIEASKSRGLERLLFALGIPQVGESTARALAKRFGHLDNILQATVEELD
AVPDIAETTAQAIHQALARPEMRSFIERLRAAGLVFEAREKQQSQALEGLTFVLTGELSR
PREEVARQLEAHGAKISGSVSKKTSYVIAGPGAGSKLSKAKELGVPILDEAGLRALLEQK
LGAAPI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccctaagcagcgcattgcggagctacgcgagctgattcgctaccacaactac
cgctattacgtgctgaacaaaccggaaatctccgatgccgagtttgaccgcctgttgcac
gagctaagaaccctggaggaagcccatcccgagctggtcacccctgactcccccacacag
accgtgggcagctccatcctcgagacccccttcacccccgtgccccaccccacccgcatg
tactcgctgggcaacgccttttcaccggacgacatcgccgatttcgaggccagcatcaac
cgcttcctgggccgggaggagccgcgcgaatacgtgctcgagtacaaaattgacgggctt
tcggtcaacctcctctacgaggcaggggtgttccgccaggggcttacccgtggcgatggc
ctgaccggcgaggacgtaacgcccaacctgctggcgattcccgacatccccaggcggcta
ccgcagcccctcgacctcgaggttcggggtgaaatttacctacccattcagacctttttg
cagctgaacgcacagctcgaggaggccggggagcctcctttcaaaaacccacgcaacgcc
gcagccggtagcctgcggcaaaaagatccccggatcagcgccagccggggcttgcggggg
ttgttctatggggtgggaaggcccgaaggcctgggggccagcacccagcaggaactgctg
gagaagctgggccagctcggcttttcggtggatccgcattaccaggtggtgcagggcgtg
gagggtatcgagcggggttaccgggccatgctggccgcgcgcaaaagcctgccatttgag
gccgatggggtgaccgtcaagctgaacaacctttccctctggaacgagctgggctacacc
gccaaaacccctcgcttcgccattgcctataagtttcccgccgaggaaaaaaccacccgg
gtgctgcgggtgatctttcaggtggggcgtaccggacgggttacgccggtggcggagctc
gagccggtcttcctggacggctccacggtgagccgggtaaccctgcacaacgaaagttac
gtacaggagctgggcttacgcatcggggataccgtcctggtacacaagtcgggcggggtg
attcccgaggtgctgcgggtggtcagcgaggcccccaggggccatgcgcctgtagagtgg
cccagccactgccccgagtgccgtacagccctcgagctttcgggcaagattcacctctgc
cccaacccgctatgcccggccaaggccttcgaggcgataaggcattttgccagccgccgg
gccatggacatccagggcctgggcgagaagctcatcgagcagctcctggaagccggtctg
gtgcgggatgccgccgatctctaccgcctcaagaaagaagacattattgccctcgagcgc
aaagccgaaaaaagcgcccagaaccttattgagcagatcgaggccagcaaaagccggggc
ctcgagcggctgctctttgcgctgggcattccccaggtgggcgagagcaccgcccgggcc
ctggccaaacgcttcgggcacctggacaacatcctccaggccacggtcgaagagctggat
gccgtaccagatatcgccgagaccaccgcccaggccattcaccaggccctggcccgcccg
gagatgcggagcttcatcgagcgtctgcgggccgccggcctggtcttcgaggcccgggaa
aagcagcaaagccaggccctcgagggtcttacctttgtcctgaccggcgagctttcccgc
ccccgggaagaggtcgcgcggcagctcgaggcccacggggccaaaatttccggctccgta
agcaagaagaccagctatgtgatcgccgggccgggggccggctccaaactcagcaaggcc
aaagagctcggcgttcctattctggacgaggcgggcctgcgggcgctgctggagcagaag
ctcggggcagcccccatctag
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