Mycobacterium tuberculosis CDC1551: MT3094
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Entry
MT3094 CDS
T00053
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mtc
Mycobacterium tuberculosis CDC1551
Pathway
mtc03030
DNA replication
mtc03410
Base excision repair
mtc03420
Nucleotide excision repair
mtc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MT3094 (lig)
03410 Base excision repair
MT3094 (lig)
03420 Nucleotide excision repair
MT3094 (lig)
03430 Mismatch repair
MT3094 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtc03032
]
MT3094 (lig)
03400 DNA repair and recombination proteins [BR:
mtc03400
]
MT3094 (lig)
Enzymes [BR:
mtc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MT3094 (lig)
DNA replication proteins [BR:
mtc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MT3094 (lig)
DNA repair and recombination proteins [BR:
mtc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MT3094 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MT3094 (lig)
MMR (mismatch excision repair)
DNA ligase
MT3094 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MT3094 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Nlig-Ia
BRCT_2
Auto_anti-p27
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
AAK47423
UniProt:
P9WNV0
LinkDB
All DBs
Position
complement(3366921..3368960)
Genome browser
AA seq
679 aa
AA seq
DB search
MLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVG
GAGFATDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLV
YREGRLTRASTRGDGRTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDF
QALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQA
YLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHRHEVDHEIDGVVVKVDEVALQRRLGS
TSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRITPFAFMTPVKVAGSTVGQATLHNAS
EIKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGSEREFIMPTTCPECGSPLAPEKEGD
ADIRCPNARGCPGQLRERVFHVASRNGLDIEVLGYEAGVALLQAKVIADEGELFALTERD
LLRTDLFRTKAGELSANGKRLLVNLDKAKAAPLWRVLVALSIRHVGPTAARALATEFGSL
DAIAAASTDQLAAVEGVGPTIAAAVTEWFAVDWHREIVDKWRAAGVRMVDERDESVPRTL
AGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTNYVVAGDSPGSKYDKAVELGVP
ILDEDGFRRLLADGPASRT
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcggcagtggcaggcactggccgaggaggtgcgtgagcaccagttccgttattac
gtgcgggacgcgccgatcatcagcgacgcggaattcgacgagctgctgcgccgtctggaa
gccctcgaggagcagcatcccgagctgcgcacgcccgattcgccgacccagctggtcggc
ggtgccggcttcgccacggatttcgagcccgtcgaccatctcgaacgaatgctcagcctc
gacaacgcgttcaccgccgacgaactcgccgcctgggccggccgcatccatgccgaggtc
ggagacgccgcacattacctgtgtgagctcaagatcgacggcgtcgcgctgtctttggtc
taccgcgagggacggctgacccgggcctccacccgcggcgacgggcgcaccggcgaggac
gtcaccctgaacgcccggaccatcgccgacgttcccgaacggctcacccccggcgacgac
tacccggtgcccgaggtcctcgaggtccgcggcgaggtcttcttccggctggacgacttc
caggcgctcaacgccagcctcgtcgaggagggcaaggcgccgttcgccaacccccgcaac
agcgcggcgggatcgctgcgccagaaagacccggcggtcaccgcgcgccgccggctgcgg
atgatctgccacgggctgggccacgtggagggctttcgcccggccaccctgcatcaggca
tacctggcgttgcgggcatggggactgccggtttccgaacacaccaccctggcaaccgac
ctggccggtgtgcgcgagcgcatcgactactggggcgagcaccgccacgaggtggaccac
gaaatcgacggcgtggtggtcaaagtcgacgaggtggcgttgcagcgcaggctgggttcc
acgtcgcgggcgccgcgctgggccatcgcctacaagtacccgcccgaggaagcgcagacc
aagctgctcgacatccgggtgaacgtcggccgcaccgggcggatcacgccgtttgcgttc
atgacgccggtgaaggtggccgggtcgacggtgggacaggccaccctgcacaacgcctcg
gagatcaagcgcaagggcgtgctgatcggcgacaccgtggtgatccgcaaggccggcgac
gtgatccccgaggtgctgggacccgtcgtcgaactgcgcgatggctccgaacgcgaattc
atcatgcccaccacctgcccggagtgcggttcgccgttggcgccggagaaggaaggcgac
gccgacatccgttgccccaacgcccgcggctgcccggggcaactgcgggagcgggttttc
cacgtcgccagccgcaacggcctagacatcgaggtgctcggttacgaggcgggtgtggcg
ctcttgcaggcgaaggtgatcgccgacgagggcgagctgttcgcgctgaccgagcgggac
ttgctgcgcaccgacctgttccgaaccaaggcaggcgaactgtcggccaacggcaaacgg
ctgctggtcaacctcgacaaggccaaggcggcaccgctgtggcgggtgctggtggcgctg
tccatccgccatgtcgggccgacggcggcccgcgccctggccaccgagttcggcagcctt
gacgccatcgccgcggcgtccaccgaccagctggccgccgtcgagggggtggggccgacc
attgccgccgcggtcaccgagtggttcgccgtcgactggcaccgcgagatcgtcgacaag
tggcgggccgccggggtgcgaatggtcgacgagcgtgacgagagtgtgccacgcacgctg
gccgggctgaccatcgtggtcaccggctcgctgaccggtttctcccgcgacgacgccaag
gaggcgatcgtggcccgcggcggcaaggccgccggctcggtgtcgaagaagaccaactat
gtcgtcgccggagactcgccgggatccaaatacgacaaggcggtggagttgggggtgccg
attctggacgaggatgggttccggagactgctggccgacggacccgcgtcacgaacgtaa
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