Microvirga terrae: HPT29_005245
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Entry
HPT29_005245 CDS
T09145
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mtez
Microvirga terrae
Pathway
mtez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPT29_005245 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_005245 (nth)
Enzymes [BR:
mtez01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HPT29_005245 (nth)
DNA repair and recombination proteins [BR:
mtez03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPT29_005245 (nth)
Prokaryotic type
HPT29_005245 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
DUF7178
Motif
Other DBs
NCBI-ProteinID:
UVF20543
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All DBs
Position
1124165..1124956
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AA seq
263 aa
AA seq
DB search
MSDLKPAPRRSSKAKAEPKAKPKVKPGAKPKAPPAVPAKTVGRALKASTPKPVDTATMVE
IFRRLRAANPEPRGELDYTNPYTLLVAVALSAQATDVGVNKATRNLFPVADTPQRMLDLG
EEGLREHIRTLNFFNTKAKNVIAAARRLAEEFGGEVPNSVEILETLPGVGRKTASVVVNI
AFGDPRVAVDTHIFRVTNRLPLAITRTPLETQEALEALIPDEFRLHAHHWLILHGRYICK
ARRPECWRCPVNDLCRYPDKTIP
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgaagcctgccccccgccgcagttccaaggcgaaagccgagcccaaggcc
aagcccaaggtcaagcccggggccaaacccaaggccccgcccgccgtcccggcgaagaca
gtcggccgggccctgaaggccagcaccccgaagccggtcgacacggccacgatggtcgag
attttccggcgcctgcgtgcggccaatcccgagcccaggggcgaactcgattacacgaac
ccttacacgctgctcgtcgctgtggcgctctccgcgcaggcgaccgatgtcggcgtcaac
aaggcgacccggaacctgtttcccgtcgccgacacgccccagaggatgctcgatctgggc
gaggagggcttgcgcgagcacatcaggacgctgaacttcttcaacaccaaggcgaagaac
gtgatcgcggcggcccggcgcctcgcagaggaattcggcggcgaggtgcccaattccgtc
gagatcctggagaccctgccgggggtcgggcgcaagaccgcgagcgtcgtggtcaacatc
gccttcggggatccgcgcgtggcggtggacacgcacatcttccgggtcaccaaccggctg
ccgctggcgatcacccggacgccgctggaaacgcaggaggcgctcgaagccctgatcccg
gacgagttccggcttcacgcccatcactggctgatcctgcacgggcgctacatctgcaag
gcccgccggcccgagtgctggcgctgcccggtcaacgacctgtgccgctacccggacaag
acgattccgtag
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integrated database retrieval system
