Methylophaga thalassica: VSX76_11485
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Entry
VSX76_11485 CDS
T09743
Name
(GenBank) TraR/DksA C4-type zinc finger protein
KO
K06204
RNA polymerase-binding transcription factor
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
VSX76_11485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtha03000
]
VSX76_11485
03021 Transcription machinery [BR:
mtha03021
]
VSX76_11485
03009 Ribosome biogenesis [BR:
mtha03009
]
VSX76_11485
Transcription factors [BR:
mtha03000
]
Prokaryotic type
Other transcription factors
Others
VSX76_11485
Transcription machinery [BR:
mtha03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
VSX76_11485
Ribosome biogenesis [BR:
mtha03009
]
Prokaryotic type
rRNA transcription factors
VSX76_11485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
WVI84399
LinkDB
All DBs
Position
1:complement(2040794..2041198)
Genome browser
AA seq
134 aa
AA seq
DB search
MDDKALLAMDEADYMNAEQLAFFDARLLELRQETLDEIGASKVDINYERVSDVSDRATLE
EEAQLALRLADRKRQLIPKIDKARQRIHQGDYGYCIESGEPIGLARLLIRPTAEYSTDIK
NINEKRERRYEDKR
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggatgataaagccttgttggctatggacgaagctgactatatgaatgctgagcagtta
gctttttttgatgccaggttgcttgaattgaggcaagagacactggatgaaattggagca
tcaaaggtcgacattaactatgaaagagtcagtgatgtatcggatcgggcgactctggaa
gaagaggctcagcttgcattaagactggccgatcgtaaacgtcagctgattcctaaaatt
gacaaagccaggcagcggatacaccagggagattacggctattgcatagaaagtggtgaa
ccgattggcttagcacggctattgattaggccaacggcagaatacagtaccgatatcaag
aatataaatgaaaaaagagaacgacgttatgaagacaaacgataa
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