Methylophaga thalassica: VSX76_12425
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Entry
VSX76_12425 CDS
T09743
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VSX76_12425 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtha03400
]
VSX76_12425 (nth)
Enzymes [BR:
mtha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VSX76_12425 (nth)
DNA repair and recombination proteins [BR:
mtha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VSX76_12425 (nth)
Prokaryotic type
VSX76_12425 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WVI84573
LinkDB
All DBs
Position
1:2251508..2252164
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AA seq
218 aa
AA seq
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MNQAQRRDFFATLKAHNPAPTTELNYSSPFELLIAVILSAQATDVGVNKATDKLYPVANT
PEKILALGVDGLKQYIKTIGLFNSKAENVIKTCKILIEQHNSQVPENREALEALPGVGRK
TANVILNTVFKHPVIAVDTHIFRLSNRTGLAKGKTVRAVEDKLMKVVPKEYLLDAHHWLI
LHGRYVCLARKPKCDTCCVTQYCDYYRDQQRRQSRSVS
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggctcaacggcgtgacttttttgccacgctaaaagcacacaatccggcgcct
accactgaactcaattattcttcgccttttgagttattgattgcggttattttgtctgct
caggccaccgatgtgggtgtcaataaagcgaccgacaaactctaccccgtcgccaatacc
cccgaaaaaattctggccctcggcgtagacggtttaaagcagtacataaaaaccattggt
ttattcaatagcaaagccgaaaatgtcattaaaacctgcaaaatactgattgagcagcat
aacagccaggtaccggaaaacagagaagcacttgaagcgttaccaggggttggccgtaaa
acagcaaacgtcattctgaataccgtttttaaacacccggttattgccgttgatacacat
atcttccgactctccaacagaacaggtctggctaaaggtaaaaccgttagagccgttgaa
gataagctgatgaaagtcgtccccaaagaatatctgttagatgcgcatcactggctgatt
ctgcatggtcgctatgtttgcctggcacgtaaaccgaaatgtgacacatgttgcgttact
caatactgtgactactatcgcgatcagcaacgtcgtcagtcacgctcagtgtcatga
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