Methylophaga thalassica: VSX76_16280
Help
Entry
VSX76_16280 CDS
T09743
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
mtha
Methylophaga thalassica
Pathway
mtha01501
beta-Lactam resistance
mtha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VSX76_16280
01503 Cationic antimicrobial peptide (CAMP) resistance
VSX76_16280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtha03036
]
VSX76_16280
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtha02000
]
VSX76_16280
01504 Antimicrobial resistance genes [BR:
mtha01504
]
VSX76_16280
Chromosome and associated proteins [BR:
mtha03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VSX76_16280
Transporters [BR:
mtha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VSX76_16280
Antimicrobial resistance genes [BR:
mtha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VSX76_16280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
BSH_CzcB
BSH_CusB
HH_YBHG
Beta-barrel_RND_2
HH_EMRA
YknX_C
HH_CzcB
BSH_YknX
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
WVI85315
LinkDB
All DBs
Position
1:3055045..3056199
Genome browser
AA seq
384 aa
AA seq
DB search
MKISPSISRVIALSALLILTACQSDEQQQGAQQQESHVDVVTLAPQKVTLRSSLPARTTA
FRQAEVRPQVNGIIEKRLFEEGAQVKEGQQLYQIDAALYEAEVANAKAQLMRAKAALQTA
KSKEARYKNLLADNAISQQDYDDALATYQQTEADIKVQEATLKTAETNLNYTHVYAPISG
QIGKSNFTEGALVTAQQTAVLTTIYQLDPIYIDVSQPSKQLLDLRKRIIARQINKEKAPK
VTITLEDGTAYSETGTLQFAEANVDPTTGDVVLRAIMPNPDNLLLPGMFVKATIEEGQLD
NVILAPQKGITFDREGNATALVVNKENKVELRQLELDQAVNDNWIVKSGLNAGDQIIVEG
LQKVAPEASVKIDNNTLQTADSGA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctcaccttcaatctcacgtgttatagcactatcggctttattgatattaacc
gcatgtcaatcggatgagcagcaacaaggtgctcaacaacaggagagtcatgttgatgtt
gtcactctcgccccacaaaaggtcacattacgtagttcattaccagctcgcactaccgcc
tttaggcaagcagaagttcgcccacaggtgaatggaattatcgagaaacgcctatttgaa
gaaggcgctcaggtgaaagaaggccaacagttatatcaaattgatgccgctttatatgaa
gctgaagtagccaatgccaaagcacaattaatgcgtgccaaagcggctctccagacagct
aaatcgaaagaagccagatataaaaatctgctcgctgataatgccatcagtcaacaagat
tatgatgatgccttagcaacctatcagcaaacagaagctgatatcaaagttcaagaagcc
acattaaaaacggccgaaaccaacttaaactacacgcatgtctatgcacctatttctggg
caaattggtaaatcaaacttcacagaaggtgcattagtgacagcccagcaaacagcggtg
ctaactacaatctatcaacttgaccctatatacattgatgtatcacaaccatcgaaacaa
ctactggatttacgtaaacgtattattgcccgtcaaatcaacaaggaaaaggctccaaag
gtcactataacactggaagatggaacggcttactctgaaacaggcaccttgcagttcgct
gaggctaatgtggatccaacaacgggtgatgtggtattgagagccattatgccaaaccca
gataatctgctgttacccggcatgttcgtcaaagcgacaattgaggaaggacaactggac
aatgtcattttagccccacaaaaagggatcacttttgatcgtgaaggcaatgccacagct
ttagttgttaacaaagaaaataaagtggagttacgtcaactagaacttgatcaggctgtt
aatgacaactggattgttaaatcagggcttaatgctggtgatcaaatcattgttgagggt
ctgcaaaaagtcgcaccagaagcatcagttaagattgataacaatacattacaaacagcg
gatagtggagcgtaa
DBGET
integrated database retrieval system
