Methylophaga thalassica: VSX76_16325
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Entry
VSX76_16325 CDS
T09743
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18146
multidrug efflux pump
Organism
mtha
Methylophaga thalassica
Pathway
mtha01501
beta-Lactam resistance
Module
mtha_M00649
Multidrug resistance, efflux pump AdeABC
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VSX76_16325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtha02000
]
VSX76_16325
01504 Antimicrobial resistance genes [BR:
mtha01504
]
VSX76_16325
Transporters [BR:
mtha02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VSX76_16325
Antimicrobial resistance genes [BR:
mtha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AdeABC [MD:
M00649
]
VSX76_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
WVI85323
LinkDB
All DBs
Position
1:complement(3066364..3069483)
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AA seq
1039 aa
AA seq
DB search
MPQFFINRPVFAWVIALFIVLIGVIAIPQLPISRYPSVAPVSVSIYATYPGATPQTLNDS
VVSLIERELSGVKNLLYFESSVDTSGTAQITATFKPGTNAELAQVDVQNRIKAVEPRLPQ
TVRQSGLQVESASSSFLMMVGMTSPDGQFDEVALNDYLARNIVEELRRIAGVGRVQLFGA
EQAMRVWVDPNKLNAYGLTMNELAQAIEQQNVQIAPGRIGDEPALPGQRLTMPLTVQGQL
TTPKEFAAIVLRASADGAKLVLGDVARVELGAQSYGFSNRENGVAATSAAIQLSPGANAV
QTASAIRERLAELAPSLPVGMAYSVPFDTAPFVKVSIEKVIYTLFEAMALVFLVMLLFLQ
NLRYTLIPAIVAPIALLGTFAVMLLAGFSINSLTMFGMVLAIGIIVDDAIVVVENVERLM
ATKGLSPREATSRAMKEITGAVIGITLVLTAVFIPMAFGSGSVGIIYQQFTLSMTVSILF
SAFLALTLTPALCANLLRPVSVEHHHKPGFFGAFNRSFERLTAGYSARVASMIGHTGRMM
ALFAVLCVVLIVAAKQLPSSFLPEEDQGYFMTSIQLPTGATSERTLEVVKAYEAHVASRP
ALDANLVVLGFSFAGSGPNAAMAFTMLKDWNQRNGATAAEEAALAQQAMADNIEGTVMSL
MPPAIDELGTSSGFSLFLQDRAHQGEAALLEAQAQLLALAAQSEVVSNVYPDGLPPGESI
RLDINRQKAEAMGLSFTAVSSTLSAAMGSLYVNDFPNAGRMQQVIIQADAHARMQLDDVL
GLRVRNVNGGMVPLREVVTPIWGESPQQMIRFQGFPSVRISGEASPGFSSGAAMVEMERL
VAQLPKGFAIAWSGLSLQERQSASQAPMLMLLSGLVVFLVLAALYESWSIPLSVMLVVPL
GLLGAVAAVLLRDMPNDVFFKVGMITIIGLSAKNAILIVEFARQLHAEGRTLIDAAVTAA
CLRLRPILMTSLAFTLGVVPLMLASGASAETQHAIGTGVFGGMLSGTILAVFFVPAFYVF
VIGLQERLSAWRRRSMSVG
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgccccagtttttcataaaccgcccagtatttgcatgggtgatcgccttgtttattgta
ttgatcggcgttattgccatcccgcaattgcctatctctcgctatccttctgtagcgccg
gtctcggtcagcatttatgcgacttatccaggagcgacacctcagacacttaatgattcg
gtagtgagcttgatcgagcgcgaattgtcaggagtgaaaaatttgctgtacttcgagtca
tcggtagatacctctggtactgcacagataaccgctacatttaaacccggtactaatgcg
gagttggcccaggtcgatgtgcaaaaccgtattaaagctgtggaaccgcgactgccccaa
actgtaagacagagcggcctgcaggttgaatcggcctcctccagttttttgatgatggtc
ggtatgacctcacccgacggtcagttcgatgaagttgcattgaacgactatctggcgcgg
aatattgtcgaggaattacgtcgaattgcaggggtggggcgtgtgcagttatttggtgcc
gagcaggcgatgcgcgtttgggtcgatccgaataaacttaacgcttatggtctgacaatg
aatgaactggctcaggccattgagcagcagaatgtacagattgcgccaggacgaattggt
gatgagccagcactgccgggacaacgcctgaccatgccactgactgtacagggacaactg
acgacccccaaggagtttgctgctattgttctgcgtgccagtgctgatggggcgaagctg
gtactgggtgacgtggcgcgagttgagctaggcgcgcagtcgtacggtttctctaatcgt
gagaatggtgtggcggcaaccagcgcggctatccaattatcacccggcgcaaacgctgtg
cagacggcttctgcgatacgcgagcgtctggccgaacttgcaccgagtctgcctgttggc
atggcctactcagtgccgttcgatacggcgcctttcgtcaaagtttctattgagaaggtg
atctacaccttgtttgaagctatggcactggtgttcctggtgatgctcttattcctgcaa
aacctgcgttatacattgattcctgccattgtcgcgcctatcgcgttacttggcaccttt
gcagtgatgctgcttgccggattttcgatcaattcactcactatgttcggcatggtgctg
gccattggtattatcgttgatgacgccatcgtggtggttgaaaatgtcgagcgattgatg
gcgaccaaagggctgtcgccaagggaagcaacctcaagagcgatgaaagagattactggt
gcagtgattggtatcactctggtgttaaccgctgtgtttatccctatggcttttggcagc
ggttcagtggggattatctaccagcaattcactctgtcgatgaccgtgtctattttgttc
tcagcgtttcttgcgctgactctgacgcctgctctttgcgctaatttattacgcccggtc
agtgttgagcaccatcacaagcctggtttttttggcgctttcaaccgaagctttgagcgt
ctgacagcgggctatagtgcacgggtggcgagcatgattggccatactggccggatgatg
gcgttatttgctgtgctttgtgtggtgcttatcgtcgctgccaagcagttaccctcatct
ttcctgcctgaggaagatcaggggtatttcatgacctctatccagttacccacaggtgcc
accagtgaacgcactctggaagtggtcaaggcttatgaggcacacgttgcttcacgtcca
gctctggatgccaatctggtggtattgggctttagttttgccggttcaggtccaaacgca
gctatggccttcactatgcttaaagactggaaccagcgtaatggtgctaccgcagctgag
gaagcggctctggcacagcaggccatggctgataatatcgagggaacggtaatgagtctg
atgcctccggccatcgacgagttgggtacttcctctggtttcagcctgtttttacaggat
cgggcacatcaaggtgaagcggccttgttggaggcacaggcacaacttctggcattggca
gcacagagcgaagtggtcagcaatgtctatcccgatggcttgccacctggcgagagcatt
cgcttggatatcaatcggcaaaaagctgaggcaatggggctgtccttcactgctgtgagc
agtactttatcggcagcgatggggtcactgtatgtgaatgactttcccaatgcgggacgt
atgcagcaagttatcatacaggctgacgcccatgctcgtatgcaattggatgatgtactc
ggcctgcgagtgcgtaatgtgaatggtggcatggtaccactgcgagaagttgtaacgcct
atatggggtgagtcgccgcagcagatgattcgctttcagggctttccttctgtacgtatc
tcaggggaagcttcgccaggcttttccagtggtgcagcgatggtggagatggaacgttta
gtcgcacagttacccaaaggttttgcgatagcctggtcaggactgtcactgcaggaacgg
caatctgcctcgcaagcaccgatgctgatgttgttatcaggcctggttgtatttctggta
ttggcggcattgtatgagagctggtcgattccgctatcggtgatgctggtagtaccgttg
ggtttgttgggggcagtggcggctgtgctactgcgtgacatgcccaatgatgtgttcttc
aaagtcggcatgataacgatcataggtttgtcagcaaagaacgctatccttattgtagag
tttgctcgtcagttacatgctgaagggcgcacattgatagatgccgctgtgacagcagca
tgtctgcgcctgcgacccattctaatgacttcgctggccttcacgcttggtgtcgttcca
ttgatgcttgccagtggcgccagtgctgaaacccagcatgccattggcacaggcgtgttt
ggtggcatgctcagcggtacgatattggctgtgttttttgtaccggccttctatgtgttt
gttatcggattacaagaacgtttgagcgcctggcgtcgccgttctatgagcgtaggataa
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