Massilia oculi: DIR46_08320
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Entry
DIR46_08320 CDS
T05448
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mtim
Massilia oculi
Pathway
mtim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DIR46_08320 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtim03400
]
DIR46_08320 (nth)
Enzymes [BR:
mtim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DIR46_08320 (nth)
DNA repair and recombination proteins [BR:
mtim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DIR46_08320 (nth)
Prokaryotic type
DIR46_08320 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DUF4817
Ogg-HhH
GntR
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AWL04440
UniProt:
A0A2S2DGF4
LinkDB
All DBs
Position
1795327..1796010
Genome browser
AA seq
227 aa
AA seq
DB search
MNPAKRLEIFTRFRAANPTPTTELEFTTPFELLIAVLLSAQSTDVGVNKAMRRLFPVANT
PQAILDLGIDELKTYISTIGLYNTKAKNVMATCRILVEQYGGEVPPVREALESLPGVGRK
TANVVLNTAFGEPTMAVDTHIFRVANRTKIAPGKNVDIVEQKLLKFVPKDFLHDAHHWLI
LHGRYTCVARKPKCWNCLIADLCEFRDKTPAPAGVLDPAVAAANAAT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgccaaacgcctggaaatcttcacccgctttcgcgccgccaatccgacaccg
accaccgaactcgagttcacgacgccgttcgaactgctgatcgcggtgctgctgtcggcc
cagtcgaccgacgtcggcgtcaacaaggccatgcgccgcctgttcccggtggcgaacacg
ccgcaggcgatcctcgacctcggcatcgacgagctcaagacctatatctcgaccatcggc
ctgtacaacaccaaggcgaagaacgtgatggcgacctgccggatcctggtcgagcagtac
ggcggcgaagtgccgcccgtgcgtgaagcgctggaatcgctgcccggcgtcggccgcaag
accgccaacgtggtgctcaatacggccttcggcgagccgaccatggcggtcgacacccac
atcttccgcgtggcgaaccggacgaagattgcgcccggcaagaacgtcgacatcgtcgaa
cagaagctgctgaaattcgtgcccaaggacttcttgcacgacgcccaccactggctgatc
ctgcacggccgctacacctgcgtggcgcgcaagcccaagtgctggaactgcctgatcgcc
gacctgtgcgagttcagggacaagacgccggcgccggccggcgtgctcgatccagcggtg
gccgcggccaacgcggcgacttag
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integrated database retrieval system
