Thermothelomyces thermophilus: MYCTH_2295204
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Entry
MYCTH_2295204 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_2295204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2295204
Spliceosome [BR:
mtm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MYCTH_2295204
Complex C
U5 SnRNP specific factors
MYCTH_2295204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
DUF6716
Motif
Other DBs
NCBI-GeneID:
11508146
NCBI-ProteinID:
XP_003658869
JGI:
2295204
UniProt:
G2Q425
LinkDB
All DBs
Position
1:join(2258134..2258296,2258354..2259505,2259558..2260549,2260668..2260755,2261024..2261589)
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AA seq
986 aa
AA seq
DB search
MDDDLYDEFGNFIGEEAEASEEESEHGVDVGNYAYDEYPEAAAEAPAAEQMDIDDEGPSN
AVVLHEDKQYYPTAAQVYGEGVETLVQEEDAQPLTQPIVAPVEHKKFSIEEADLPPVYFD
RNFMTDLMNFPEQIRNIALAGHLHHGKTAFMDMLVLETHAITDRLDKRTGKKRDEQLRYT
DVHVIERDRGLSIKAAPMSLVLQNTKGKSHLFNIIDTPGHVDFVDEVAASLRLVDGVCLV
VDVVEGVQANTEQIIKHAVLEDIPLTLIVNKMDRLILELKIPPNDAYYKLKHVIEEVNKV
IEDTIPGRGVEKRVSPEKGNVLFSCTSMGWCFTLASFAKMYSDSFGGINIDEFARRLWGD
VYFNPRKRNFTRKPIEKEAKRSFVNFVMEPIYKLYSHTISESPEDLKKTLGKLGIELKPS
QYKSDPKVLMKLVCEQFFGPSTGFVDMVCQHIPSPVEAAEKKLSQYYTGPLDTKVAESMK
KCDQNGPLVIHVTKLFNTSDAKSFYSFGRVMSGIVRPGTEVRVLGEGYSIDDEEDMVLGK
VSDVFIAETRYNIPTDGVPAGNWVLLGGVDNSIVKTATIVDKKFEDEEDAYIFKPLSHFT
ESVLKVAVEPINPSELPKMLDGIRKINKSYPLIATKVEESGEHVILGTGELYMDCVLHDL
RRLYADMEVRVSDPVVRFCETVQDMSATKCYAITPNKKNTITMAAEPLDDGIAKDIESGA
VRIRDPVRKTAKFFEEKYGWDMLAARSIWAFGPDEMGPNILQDDTLPTEVDKKRLNTVKE
SIRQGFSWATREGPLCEEPIRNTKFRLIDIELAQEAIFRGGGQIIPTARRACYSSFLMAS
PRLMEPVYSVSMTGPQDSVSTVYNILARRRGHVLSDGPIAGTPLYRVDGLLPVIDSFGFE
TDLRINTPGRAMVSLVFDRWSIVPGDPLDREQVTRPLQMAAPLATARDFVLKTRRRKGLS
EDVTVAKFLEPEFYQKLLEEGTLDGV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatttatacgacgagttcggcaacttcattggcgaggaggccgaagcttct
gaggaagaatccgaacatggggtggacgtgggtaactatgcctacgacgaataccccgaa
gccgccgcagaggcgcccgctgcggagcagatggacattgatgatgaagggccatcaaac
gcagtcgtcctccatgaagacaagcagtactacccaaccgcggcgcaagtgtacggagag
ggagtcgagacattggtacaggaggaggatgcgcagcctttgactcagccgattgttgcc
ccggttgagcacaagaagttcagcattgaggaggcagacctaccgccggtctatttcgac
cgcaacttcatgaccgatctcatgaatttcccagaacagatccgcaacatcgctttggcg
gggcacctgcaccatggcaagactgcgtttatggacatgctggtcctggagacccacgcc
atcacagataggttggataagcggacagggaaaaagcgtgacgagcagctccgatacact
gacgtacatgtcatcgagcgggaccgagggctgtcgatcaaggccgcgcccatgagcctt
gttctccaaaacacaaaagggaaatcacacctcttcaacatcatcgacacaccggggcat
gtggattttgtcgacgaggttgccgcttctctccggctcgtggacggagtttgcctagtg
gtggacgttgtggaaggtgtccaggccaacacggagcagatcattaaacacgccgtactc
gaagatattccccttactctgattgtcaacaagatggatcgcttgatactcgagctcaaa
atcccgcctaacgacgcatactacaagctgaagcatgtcatcgaggaagtcaacaaggtc
atcgaggacacgattcccggccgaggcgtggagaagagggtgagtcccgaaaaggggaac
gttctcttctcttgtacatcgatgggctggtgcttcaccctggcgtctttcgccaagatg
tactccgacagcttcggcggcattaacattgacgaattcgcccggcggctgtggggcgac
gtctacttcaaccctcggaaacgcaactttaccagaaagccgattgagaaggaggccaag
aggtcctttgtcaacttcgtcatggagccgatatacaaactttactcgcacacgatcagc
gagagcccggaggacctgaagaagacgttggggaagcttggaatagagctcaaaccgtct
cagtacaagtcagacccgaaggtgctcatgaaactggtgtgcgagcaattctttggacca
tcaacagggttcgtggacatggtgtgccaacatattccctcgccagtagaggctgccgag
aagaagctgtctcagtattacaccggtccgctcgatacaaaggtggcagagtcgatgaag
aagtgtgaccaaaacggaccgctagtcatccatgtgacgaagctgttcaacacttctgac
gccaagagtttctactcgttcggccgtgtgatgagcggcattgtgcggccgggcaccgag
gttcgagtgctcggtgagggttactctattgatgacgaggaggacatggtgctagggaag
gtctcggatgttttcattgccgaaacgcgatacaatatcccgaccgacggtgttccggca
ggtaactgggtactcctaggaggtgttgacaactcgattgtcaaaaccgccacgatcgtc
gacaaaaagttcgaggatgaagaggacgcatacatcttcaagccattatctcacttcacc
gagtctgttctcaaggtcgcagtcgaaccgatcaacccatcagagcttcccaagatgctt
gacggcatcagaaagatcaacaagagctacccgctgatcgcaaccaaagtggaggagtca
ggagagcacgtcatcctcggtactggggaactgtacatggactgcgtactgcacgatctg
cggcggctatacgccgatatggaggtcagggtgtctgaccctgtcgtccggttttgcgaa
acggtgcaagacatgtcagccacgaagtgttatgccatcacacccaacaagaagaacact
atcaccatggcagcggaacccttggatgacgggatagccaaggacatcgagtcgggtgcg
gtccggatacgggacccagtgaggaagacagccaagttctttgaggagaagtacggctgg
gatatgctcgcggcgaggagcatctgggcattcggtcccgacgagatggggccgaacatt
ctacaagatgatacactaccaacagaggttgacaagaagcggctcaacacggttaaagag
tcgattcgccaggggttcagctgggccacccgtgaaggcccgctatgtgaagagcccata
cgcaacaccaagttccgacttatcgatatcgaactggcacaggaagccatcttccgcggt
ggcggacagatcatccccacggctcgccgggcgtgctattcgtctttcctgatggcctcg
ccgcgtctcatggaacccgtgtactcggtctcgatgacgggcccgcaggattcggtcagc
accgtctacaacattcttgcccgccgccggggtcacgtcttgtccgacggccccatcgcg
ggcactcccctctaccgggtcgacggcctgctgcccgtgattgacagcttcgggttcgag
accgacctgaggatcaatactcccggacgtgccatggtcagtctcgtgttcgaccgctgg
agcatcgtgccaggcgacccgctcgatcgcgagcaggtcacgcggccgctacaaatggcg
gcccctctggcaacggcgagggattttgtgctcaagactcggaggcggaaggggttgagc
gaggatgtgacggtggccaagtttctggagcccgagttctaccagaaactgctcgaggag
gggacgctggatggcgtctga
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