KEGG   Thermothelomyces thermophilus: MYCTH_2303370
Entry
MYCTH_2303370     CDS       T02231                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
mtm  Thermothelomyces thermophilus
Pathway
mtm03018  RNA degradation
mtm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCTH_2303370
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYCTH_2303370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtm03019]
    MYCTH_2303370
   03041 Spliceosome [BR:mtm03041]
    MYCTH_2303370
Messenger RNA biogenesis [BR:mtm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MYCTH_2303370
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MYCTH_2303370
Spliceosome [BR:mtm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MYCTH_2303370
 Complex C
  U2 snRNP components
    MYCTH_2303370
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 11512661
NCBI-ProteinID: XP_003662585
JGI: 2303370
UniProt: G2QCL7
LinkDB
Position
3:complement(join(703965..704008,704068..704104,704187..704273,704360..704482))
AA seq 96 aa
MAEARDEGNAVSEPLDLVRLLLDEVVCVKLRGDRELKGRLHAYDSHCNLVLGDVEETIYV
VDDEDDEDVKTVSKKSEMLFVRGDSVVLISPHAASF
NT seq 291 nt   +upstreamnt  +downstreamnt
atggccgaagccagggatgagggcaacgccgtgtcagagcccctcgacctcgttcgcctg
ctactcgacgaagtggtctgcgtgaaactgagaggggaccgagagctcaaaggacgcctc
catgcttacgacagccactgcaacctcgtgctcggtgatgttgaagagacaatctacgtc
gttgacgacgaggatgacgaggacgtcaagaccgtgagcaagaaatccgaaatgctattt
gtgagaggcgatagcgtcgtcctcatatctccccacgcagcatcgttttga

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