Medicago truncatula (barrel medic): 11406493
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Entry
11406493 CDS
T01716
Name
(RefSeq) transcription factor PIF3
KO
K12126
phytochrome-interacting factor 3
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
mtr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
11406493
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
11406493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
11406493
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
11406493
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
11406493
NCBI-ProteinID:
XP_003591254
UniProt:
G7IAC4
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All DBs
Position
1:41806331..41810797
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AA seq
721 aa
AA seq
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MPLYELYRLAREKLDNETNGTSVADQPSSPENDFFELVWESGQISSQGQSSRGRKSPSCR
SLPSHCLPSHSPRGRDKDKDVGGGFSNNNPKIGKFGDLDSGLNEIPMSVPSREVDEMMPW
LDYSMDGSLQHEYGSDFFHELTENDLPASNSFTLLDKRNNGNQIFRDSHKNSAEAMNVSK
GSSAEQVVETARHKASASQLYPPSSNQCQTTSVTVRSRASDITENNNVSSGNQDVPYGDI
TRIPSSSSDFSSLKAQKQDPVMPGNGSNVMNFSHFARPAAIVRANLQNIGLKSGLNSASA
RSDIMGVKNKGAASTSSNPPDSALVNPSGECSKEPEMRCHKVVEPSKADLKPLQPKSLEP
NAVATKQSKPACKENGIKNDQPSIQVLGDNGAKGHAAADKGMEVAVASSSVCSGNGADRG
SDDPNRDLKRKSRDTEDSECHSEDVEDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRR
RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMPQMMLPAG
MQHMHAPHMAAFSQTGIGMHMGLGMGYGMGMPDMNGVPSRFPMIQVPQMQGNHVPVAHMP
GPSAMHGMARSNTQGFVLPGQGTSMPMPHTPVFPFSGGPLMNSSAPGPSVYGSTGHVEAV
NPASACGSKDRRPDVDSKIKQNTAGRDSTSQIPNQSTLVHNGGHTSVADDSEAANPGNIT
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttatgagttataccgtttggccagagagaagcttgataatgagactaacggc
acaagtgtagcagatcaaccttcgtcgcctgagaatgatttttttgagctggtttgggag
agtggtcagatttcaagccaaggtcaatcaagtagaggtagaaagagtccatcttgtagg
agtttgccatctcactgtttaccatctcatagtcctagaggtcgagataaagataaagac
gtaggaggaggatttagtaacaacaatccaaagataggaaagtttggtgatttagactct
ggattgaatgagattccaatgtcggtgccatctcgcgaagtggatgaaatgatgccttgg
ttggattattcaatggatggctctttgcaacacgaatatggttctgatttctttcatgaa
ctcacggagaatgaccttcctgcctcgaatagttttactctattggataaaaggaataat
gggaatcagatatttagggactctcataaaaattctgcagaagcgatgaatgtttccaag
ggttcttcagctgaacaggttgttgagactgcaagacataaagctagtgccagtcagtta
tatcccccatcatcaaatcaatgtcaaacaacatctgtaactgttagatctagggcatca
gatataaccgaaaataataatgttagtagtggtaaccaggacgtgccttatggggatatt
actcgcattccatcttcctcgagcgatttttctagcttaaaagcgcagaagcaagatcct
gtaatgcctggcaatggttccaatgtaatgaatttttcccattttgcaaggcctgcagct
attgtgagagctaatcttcagaacattggcttgaagtctggtttgaattcagcttcagca
agatcagatattatgggagttaagaataaaggcgctgcttcgactagcagcaatcctcct
gattcagctcttgttaatccaagcggtgagtgttcaaaggaaccggaaatgcgttgtcat
aaggtggtagagccatccaaggctgatttgaaacctttgcagccgaaatcgcttgaaccg
aatgctgtagctactaaacaatcgaagcctgcttgcaaagagaatggaattaagaatgat
caaccttccattcaagttcttggtgacaatggcgctaaaggacacgcagctgctgacaaa
ggcatggaggtggcagtagcctcttcttctgtttgctctggcaatggtgcagacagaggc
tcggatgatccaaatcgagatttaaaacggaaaagtagagacactgaggactctgaatgc
catagtgaagatgttgaggatgaatcagtgggagttaaaaagggagcggctggacgagga
gttgcaggttccaaaagaagccgtgctgctgaagtgcataatctatctgaaaggaggcga
agagacaggataaatgagaagatgcgtgcattgcaagaactcatacctaattgcaataag
gtggataaagcttctatgctggatgaggcaattgagtatctaaaaacacttcagctccaa
gttcaaatgatgtcaatgggagctggtttatatatgcctcaaatgatgttacctgctgga
atgcagcacatgcatgcaccacacatggccgcattttcacagacgggcatcggcatgcat
atggggttaggtatgggttatggaatgggaatgcctgacatgaacggcgtgccgtctaga
tttccaatgattcaagtacctcagatgcaaggaaatcatgtgcccgttgcgcatatgcct
ggaccctctgctatgcatggaatggccagatcgaatactcaagggtttgtacttccggga
cagggaacttccatgccaatgccgcatactccggtattccctttttcaggagggcctctt
atgaactcatccgctccgggtccgtctgtgtatggatccacaggacatgttgaagctgtg
aatccggcttcagcgtgtggctcaaaagatcgaaggccagatgtggactcaaaaattaag
caaaacactgctggtcgtgactctacaagccagatccctaaccagtcaactttggtacat
aatggtggccatacttcagtggctgatgacagtgaagctgctaatcctggcaatatcact
ttgtga
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