Medicago truncatula (barrel medic): 11413962
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Entry
11413962 CDS
T01716
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03420
Nucleotide excision repair
mtr04120
Ubiquitin mediated proteolysis
mtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
11413962
04120 Ubiquitin mediated proteolysis
11413962
09124 Replication and repair
03420 Nucleotide excision repair
11413962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11413962
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11413962
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
11413962
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
11413962
Multi subunit type E3
SCF complex
Ring finger protein
11413962
Cul2 complex
11413962
Cul3 complex
11413962
Cul4 complex
11413962
Cul7 complex
11413962
Cul8 complex
11413962
Cul9 complex
11413962
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
11413962
TCR (transcription coupled repair) factors
Cul4-CSA complex
11413962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
DUF8003
Motif
Other DBs
NCBI-GeneID:
11413962
NCBI-ProteinID:
XP_003597006
UniProt:
G7IKI7
LinkDB
All DBs
Position
2:43441220..43444934
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVPMVPAGETSCCAHGGPSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttgattccgacgttccaatggttcccgccggcgaaacttcctgctgcgct
cacggcggtccttcttccaagaagccgaagcgcttcgagatcaagaaatggaatgctgtt
tctctctgggcttgggatattgttgttgataattgtgctatctgtaggaatcatatcatg
gatctctgtattgagtgtcaggcgaatcaggctagcgccacgagcgaggaatgcacagtt
gcttggggggtttgtaaccatgcttttcacttccattgcataagcaggtggctgaaaacc
cgtcaagtttgtcctctagacaacagtgagtgggaatttcagaaatacggccactag
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